Gene Hhal_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2299 
Symbol 
ID4709445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2526851 
End bp2528080 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content73% 
IMG OID639856774 
Productphosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 
Protein accessionYP_001003864 
Protein GI121999077 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTGC CGAGCCGACC GATCCGCATC CTGCTCGTGG TGACCGGCGG GATCGCCGCC 
TACAAGGCCG CTGACCTGGT GCGCGAGCTG CGCCGCGGCG GTGCCGACGT GCGCGTGGTG
ATGACCGCGG CCGCGCAGCA CTTCGTCACC CCGCTGACCT TCCAGGCCCT GTCCGGCCAC
CGCGTCCATA CCGATCTGCT GGATCCGGAT GCCGAGGCGG GGATGGGCCA TATCGAGCTG
GCGCGCTGGC CGGATCGCAT CGTCGTGGCA CCCGCCACCG CGGATTTCCT GGCACGCCTG
GCCCAGGGGC GCGCGGACGA CCTGCCGGCG GCGCTGTGCC TGGCCTCGCG GGCGCCGATC
ATGGTGGCCC CGGCCATGAA CCACGTCATG TGGGAGGCGG GGGCGACCCG CGAAAACCTG
GCGACCCTGC ACCGCCGCGG CGTGGCGTGT ATCGGCCCCG AGGTTGGTGA ACAGGCCTGC
GGGGAGTCTG GCGAGGGGCG CATGTCCGAT CCGGCGGCCA TCGCCGCGGC CCTCCTCGAT
GCCGGGGGCG CCGCCGGGCC GTGGGCCGGG CGCACGGTGC TGATCACCGC CGGCCCCACC
CGCGAGCCCC TCGACCCGGT ACGGTACCTG ACCAATCGCA GCTCCGGCCG GATGGGCTTC
GCCCTGGCGG CCGCCGCCCG TGAGGCTGGC GCCCGGGTGA TCCTCGTGGC CGGCCCCACG
GCGCTGGCCA CGCCCCCGGG CGTGGAGCGA GTCGATGTCG AGCGGGCCGG GCAGATGTAC
GATGCCGTGC TCGGTTGTAT CGATGAGGCG GACTGCTTCA TCGCCGCCGC AGCCGTGAGC
GACTATCGGC CCGAGCGCGA GGCGCCTGAG AAGATCAAGA AAGGCGGGGA CGCCCTGACC
CTGGCCCTGG AGCCCACGCC GGATACCTTG CGGGCCGTGG CGGCCCGCTC GCCCCGGCCC
TTCGTGGTGG GGTTCGCCGC CGAGACCGAG CGCGTCAGCG AGTACGCCCG GCGCAAGCTC
AACGACAAGG ATCTCGACCT GATCGCCGCC AACCGCGTCG GTCCGGGTCA GGGGTTCGAT
ACCGACGACA ACGCCCTGGA AGTCCTCTGG CGCGACGGCA GCGTCGCCCT GGCCGAGCAG
CCCAAGACGG CACTGGCCCG GGAGCTGCTG CAGATCGTGG CCGAGCGCGC CGGGTTCGCG
GAGGCAACGA GGAGCCACCA TGCACCGTAG
 
Protein sequence
MSLPSRPIRI LLVVTGGIAA YKAADLVREL RRGGADVRVV MTAAAQHFVT PLTFQALSGH 
RVHTDLLDPD AEAGMGHIEL ARWPDRIVVA PATADFLARL AQGRADDLPA ALCLASRAPI
MVAPAMNHVM WEAGATRENL ATLHRRGVAC IGPEVGEQAC GESGEGRMSD PAAIAAALLD
AGGAAGPWAG RTVLITAGPT REPLDPVRYL TNRSSGRMGF ALAAAAREAG ARVILVAGPT
ALATPPGVER VDVERAGQMY DAVLGCIDEA DCFIAAAAVS DYRPEREAPE KIKKGGDALT
LALEPTPDTL RAVAARSPRP FVVGFAAETE RVSEYARRKL NDKDLDLIAA NRVGPGQGFD
TDDNALEVLW RDGSVALAEQ PKTALARELL QIVAERAGFA EATRSHHAP