| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2293 |
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| Symbol | |
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| ID | 4709453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2518613 |
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| End bp | 2519728 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639856768 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001003858 |
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| Protein GI | 121999071 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCGC GGCTCCATCA TGGACCCCGC CCGAGCCTGC GGGCAGCGGT CCTACTGGTC
AGCGCCCTCG CCCTCGCCAC CGGCTGCACC GACCACGGCG CCGAGGAACC TCCCGACCAA
CGGCCCCGCC CGGTCCAGAC CCTGATCCTA GAAGACCCCG ATCAGCTCGC CGAGCGCCGC
TTCACCAGCC GCGTGGCGGC GCAAAACCGG GCGTGGGTCT CGTTCCGCGT CGGCGGTGAG
CTGGAGGGTG TCCACGCCGA GGTCGGCGAC CGCGTCGCCG CCGGCGAGCG CCTCGCCGAA
CTGGACGACT CCGACCACGT CCGCGAGGTC GACGAGTTGG AGGCCCAGCT CGAGGCGGCA
CGGGCACGGC AAGCCTACGC CGCCACCGAG TACCTGCGCG CCGCGCAGCT GGTGGAGGAA
GAGGCGATCA CCCAGTCGGA ATACGACCAG GCCGCCCGCC AGCGCGACGA GGCCCAGGCC
GAAGCCGCCT CGCTGCAGGC CGGGCTGGCC CTGGCCCGGG ATCGACTGGC CTACACCCGC
CTGCGCGCCC CTTTCGACGG AGCCGTCGCC GAACGCCGCT TCGACACCCA CGAGGCGGTG
CCGCCCCAGG AACCGGTCTA CCTGCTAGAG GACCTCTCGC AGCTGGAGGT CGAGGTCGGT
ATCCCCGAGG AGTTCATGGT CTACCGGGAC CATCTGCAGC AGGTGCAGGT CCGCATTCCG
GCCCTCGACG CCGTGTACCC GGGGCGCATC CGCACCGTGG GCGTGGACGT GCTCCCCGAG
CGCCAGACCT ACCCGGTCCA GGTCGCCCTG ACCGAGCCCG GGGAGCAGTT GCTACCCGGC
ATGACTGCGG AGGTCATCTT CCACGCCGAG ATGGACCCGA GCGAGGGGTT CCGCATCCCC
CTAACCGCCC TCCACGAGCA CGACAACGAA CACCAGGTCT GGCTCCGCGG GGATGACGGC
ACGGTCCGTC GTCAGGCCGT GGAGCTCATC GCCCTGGACC GGCGCAGCGC CCTGGTGGCG
GACGGGCTGG AGACCGGTGA CGAGGTGGTG ACCGCCGGCG TGCACCACCT GGCCGAAGGC
CAGCCCACCC GGCGGATGGA TCCGGAGGCG CCGTGA
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| Protein sequence | MDARLHHGPR PSLRAAVLLV SALALATGCT DHGAEEPPDQ RPRPVQTLIL EDPDQLAERR
FTSRVAAQNR AWVSFRVGGE LEGVHAEVGD RVAAGERLAE LDDSDHVREV DELEAQLEAA
RARQAYAATE YLRAAQLVEE EAITQSEYDQ AARQRDEAQA EAASLQAGLA LARDRLAYTR
LRAPFDGAVA ERRFDTHEAV PPQEPVYLLE DLSQLEVEVG IPEEFMVYRD HLQQVQVRIP
ALDAVYPGRI RTVGVDVLPE RQTYPVQVAL TEPGEQLLPG MTAEVIFHAE MDPSEGFRIP
LTALHEHDNE HQVWLRGDDG TVRRQAVELI ALDRRSALVA DGLETGDEVV TAGVHHLAEG
QPTRRMDPEA P
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