| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2280 |
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| Symbol | |
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| ID | 4709124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2503016 |
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| End bp | 2504095 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639856756 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001003846 |
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| Protein GI | 121999059 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCCA CTTCAGCCAC GAGTGATCGC TACAGGGCGT ACCGCTGGGC GGTGAACCGC
GCCTATCAGG AGGCAGCGCT GCCCGGTGTG TCGCGTACCT TTGCGCTGAC CATCCCGCAG
CTGCCCGAGG TGCTGCGCGA TACCGTCACC AACGCCTACC TGCTGTGTCG GGTGGCGGAT
ACCATCGAAG ACCATTCGGC CGCCGACGTG GAGGTCAAAC ACGACCTGAT GCTCGGCCTC
AAGGAGGCCC TGAACGGTGC CCGCGATCCC CAGCAGCTCG CCGGTCAGAT CGAAGCCGTG
CTCGACTGGG ACACGCCGCC CGCCGAGCGT GACCTGGTCG TCTCGCTGCC GCGGGTGATC
GCGGTCACCG GCGGCCTGCC GGAGGCCCAC CAGGGGCCGG TGATCCGCTG CGTCTCGATC
ATGGGCGAGG GCATGGCGCG CTTTCAGCGC CTGCGCTCGC CGGTCGGGCT GGCCGACCGT
GCGCAGTTCG AAGAGTACTG TTACTACGTC GCCGGCGTGG TGGGCGAGAT GCTCACGGAC
CTGTTCATCC TCGAGGTCGA AGGTTTCGAC GGCGATCGCG ACGAGATGAT GGACCTGGGG
CGGCGCTTCG GCCTGGGGCT GCAGGCGACC AATGTCATCA AGGACGTCTG GGCCGACCGT
GAGCGAGGCG TCTGCTGGCT GCCGCGGGAG ATCTTTACCG AGTCCGGTTG CAGCCTGGGC
CCGGACGCCG ACTGGAGCGA GGATCCCGGG TTCCATCGCG GCATCGGTCG CATGATCGAG
ATCGGCGTCG AGCACATGGA GGCGGCGCGC GCCTACATCC TGCGCATCCC GCCGACGCAG
CCCGGTATCC GCCGCTTCTG TGCCTGGGCG GCGACCATGT CCCTGGCGAC CTTGCGGCAG
ATCCGGCGGC ACCCCGGCTT CAAGTCCGGC GACGAGGTGA AGATCAGTCG CCGCCAGGTC
CGCCGCCTGG CGGGACTGAC CAACTACGCC GCCGAGCGCG ACTGGGCCAT GCGCACCGTG
CTGGCCTGGA GTGGCCGCGG CTTGCCGCGG CCGCTGGTCC GCTCGTCGGG GCAGGGCTGA
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| Protein sequence | MHSTSATSDR YRAYRWAVNR AYQEAALPGV SRTFALTIPQ LPEVLRDTVT NAYLLCRVAD
TIEDHSAADV EVKHDLMLGL KEALNGARDP QQLAGQIEAV LDWDTPPAER DLVVSLPRVI
AVTGGLPEAH QGPVIRCVSI MGEGMARFQR LRSPVGLADR AQFEEYCYYV AGVVGEMLTD
LFILEVEGFD GDRDEMMDLG RRFGLGLQAT NVIKDVWADR ERGVCWLPRE IFTESGCSLG
PDADWSEDPG FHRGIGRMIE IGVEHMEAAR AYILRIPPTQ PGIRRFCAWA ATMSLATLRQ
IRRHPGFKSG DEVKISRRQV RRLAGLTNYA AERDWAMRTV LAWSGRGLPR PLVRSSGQG
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