Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2277 |
Symbol | |
ID | 4709468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2498946 |
End bp | 2499530 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639856753 |
Product | HNH endonuclease |
Protein accession | YP_001003843 |
Protein GI | 121999056 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCGAAC ATCGCATATT ACGCACCGAC ATATCCGGCA TGCCGCTGGA GTGGGTCGGC TTCGAAGAGG CGGTCCGCTA CTACTACCTC GGCCAGGTGG CCTACGCCTG CGGTAGCACC CTTTATCGGG TCCGGGGCGG GTACAACTCG GCCACCGGAC GACGATCGTT CGTCGACCTG AACTCGATCA TCGCCACCGA GGGAACCCGA CAGGCATCGC TCAAGGGTCG TCCGGGCTAC ACGCCGCCCC TGAACAACCC GACCCTCTTC CGCCGCGACG CCCACCTCTG CCTCTACTGC GGCCGCCGCT TCCGCACCTC CGACCTCTCT CGCGATCACG TCACCCCGGT CAGCCGCGGT GGTGCCAACA CCTGGAACAA CGTGGTCACC GCCTGCAAGC GCTGCAATAA CCAAAAGAGC GACCGGACTC CGGAGGCGGC GGGCATGGAG CTGCTCGCGG TGCCCTTCAC CCCGACCCAC GCGGAGTACG TCTACCTGCA GGGCCGGCGG ATCCTCGCCG ACCAGATGGA GTTCCTGAAG TCGCACTTTC CCCGCCGCAG CCCGCTGCGG GTGCGCGAGC CCTAG
|
Protein sequence | MLEHRILRTD ISGMPLEWVG FEEAVRYYYL GQVAYACGST LYRVRGGYNS ATGRRSFVDL NSIIATEGTR QASLKGRPGY TPPLNNPTLF RRDAHLCLYC GRRFRTSDLS RDHVTPVSRG GANTWNNVVT ACKRCNNQKS DRTPEAAGME LLAVPFTPTH AEYVYLQGRR ILADQMEFLK SHFPRRSPLR VREP
|
| |