| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2253 |
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| Symbol | |
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| ID | 4709145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2473084 |
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| End bp | 2475495 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639856729 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001003819 |
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| Protein GI | 121999032 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.816825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAT TCCTGCGTAT CCTCCTTTAC AGCACCCTCA CCCTGGTCGG TTCCGGCGCC
GTGCTGGGTG CCGCGGCGGT GGCTTATGCC CTGCTGGTGC TTGCTCCGCA GTTGCCCGAT
GCGGAGTCGC TGCGCGACGT GCGCTTCCAG CAGCCGCTGC GTGTTGTCAG CGCCGAGGGC
GAGCTGATCG CCGAGTACGG CGAGCAGCGC CGCCAACCGG AGGATATCGA CGACATCCCC
ACGGACCTGT TGCTGGCGTT CATCGCCGCT GAGGACGACC GCTTCTACGA GCACCCGGGG
GTCGACTATC AGGGCCTGGC GCGGGCGGTG AGCCACGTGG CCCGCGAGCG CTCCTTCGGC
CCGGGGGGGT CGACCATCAC CATGCAGGTT GCGCGCAATT TCTTCCTCTC GCGCGAAGTC
ACCATCCTGC GCAAGGTCAA CGAGATCCTG CTGGCGCTGC AGATCGAGCG CACCCTGTCC
AAGGAGGAGA TCCTCGAGCT CTATCTCAAC AAGATCTACC TGGGCAATCG CGCCTACGGC
GTTGCTGCCG CCGCCCAGGT CTATTACGGC AAGGACCTGG ATGAGCTGGA TCTGGCCCAG
ATGGCGATGA TTGCCGGTCT GCCCAAGGCG CCCTCGGCCG CCAACCCCAT CCGCAATCCC
CGGTTGGCCC TGCAGCGGCG TGCCTACGTC CTTGGGCGGA TGCTCAACGA GGGCTTCATC
AGCCCGGAGC GTTATCAGGA GGCTATGGCC GCACCGGTAA CCGCGGAACT GCACGCCCCG
CGCAGCCGTG TGGATGCCCG TTACGCCGGG GAGATGGTCC GCCGCACCAT GACCGAGCGC
TACGGGGCCG AGGAGGCGTA TACCGGCGGC TATACGGTCT ATACCACCAT CGAGAAGGAC
CGCCAGGAGG CGGCCAACCG TGCCCTGCGC AGCGGGTTGC GCGATTACGA CCAGCGCCAC
GGCTACCGGG GCCCCGAAGG CAGCATGGAC GCGCAGGCCG TCGGCGACCC GGCGGCCATG
AACGAGGTGC TGGGGGAACA CCCGCCGTTC GGCGGCCTGC AAGCGGCCGT GGTGCTCGCC
GTAGAGCCCG AGGCGGCCTG GGTCTGGCCC CGGGGCGGGC GGGTGCTGCA GGTGGACTTC
GAGACCATGG AGTGGGCGCG TGCCTACCGG GGTGCCAATC GGCGCGGCCC GGCCCCGGAA
GAGGCGGGTG ACGTGCTCGA GGTCGGCGAT ATCGTGCGGG TGATGCCGCA GGGCGAGGGG
CGGGCGGCGC TCAGCGCCGT GCCCGACGTC TCCGGCGCGC TGGTCGCCCA GGATCCGCTG
GACGGGCGCG TGCGGGCCCT GGCCGGTGGG TTCGATTTCC GCCTCAGCTC CTTCAACCGG
GCGGTCCAGG CGCGGCGTCA GACGGGGTCG GTCTTCAAGC CGTTCATCTA CTCGGCGGCC
CTGGAAGGCG GCTACACGCC GGCCACCCTG GTCAACGACG CCCCGGTGGT CTTCCGGGAC
GACGCCCTGG AGAGCTACTG GCGCCCCGGC AACTACTCGG GGCGGTTCTA TGGCCCGACC
CGGCTGCGCG AGGCCCTGGT CTTCTCGCGC AACCTGGTGT CGATCCGGGT GCTGCGCGAT
GTGGGGATCG ACCCGACTAT CGCCCATGCC GTGCGTATGG GCTTCCCGCC GGAGAGCCTG
CCGCGGGATC TCTCCCTGGC GCTGGGCAGC AATAGCGCCA CTCCGCTGCA GATGTCGAAC
GCCTTTGCGG CGTTCGCCAA CGGTGGCTAC CGCGTCTTCC CCAATATCAT CGAGCGGGTG
GAAGACGGCG CCGGTGAAGT GGTCTTCGAG CCCGAGTTTC CGGAGGCGTG TGAGCTCTGC
CGTGACGACC TGCCCATGGC CTCGGTGCCC GGTGACCGCA CTGGCCTGTT CGATCTGCCG
CCCCCGGCAG AGCGTGTCCT GCCGGAAGAC AACGCCTGGC TGATCAGCGA TATGCTCGCC
GACGTCATTG AGCGTGGCAC CGGACGGGGC GTGCGGCGGG TGCTCGATCG CGGGGACCTG
GCCGGCAAGA CCGGTACCAC CAACGATCTG CGCGACGCCT GGTTCGTGGG GTACAACCAG
GATCTGGTGG CCACGGCGTG GATCGGTTTC GACGACCAGC GCAGCCTGGG GCGTGGCGAA
ACCGGTGCTT CGGCCGCCCT GCCCATCTGG GCCCGCTTTA TGTCCGTAGC CCTCGACGGG
GTCGAGGAGC GCCCCATGCC GCGCCCGGGC GGCTTGGTCA CGGTGCGCAT CGACCCGGAG
TCGGGGCGGG CCACCAGCTC CGAGAACCCT GACGCCATTT TCGAGACCTT CCGCGAGGAG
ACCGTCCCGG TCCGTGACGA CAGCGATCGC CGGCAGCGTG GTGATGAGCA CACGGAGCGG
GAACTCTTCT AG
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| Protein sequence | MKRFLRILLY STLTLVGSGA VLGAAAVAYA LLVLAPQLPD AESLRDVRFQ QPLRVVSAEG
ELIAEYGEQR RQPEDIDDIP TDLLLAFIAA EDDRFYEHPG VDYQGLARAV SHVARERSFG
PGGSTITMQV ARNFFLSREV TILRKVNEIL LALQIERTLS KEEILELYLN KIYLGNRAYG
VAAAAQVYYG KDLDELDLAQ MAMIAGLPKA PSAANPIRNP RLALQRRAYV LGRMLNEGFI
SPERYQEAMA APVTAELHAP RSRVDARYAG EMVRRTMTER YGAEEAYTGG YTVYTTIEKD
RQEAANRALR SGLRDYDQRH GYRGPEGSMD AQAVGDPAAM NEVLGEHPPF GGLQAAVVLA
VEPEAAWVWP RGGRVLQVDF ETMEWARAYR GANRRGPAPE EAGDVLEVGD IVRVMPQGEG
RAALSAVPDV SGALVAQDPL DGRVRALAGG FDFRLSSFNR AVQARRQTGS VFKPFIYSAA
LEGGYTPATL VNDAPVVFRD DALESYWRPG NYSGRFYGPT RLREALVFSR NLVSIRVLRD
VGIDPTIAHA VRMGFPPESL PRDLSLALGS NSATPLQMSN AFAAFANGGY RVFPNIIERV
EDGAGEVVFE PEFPEACELC RDDLPMASVP GDRTGLFDLP PPAERVLPED NAWLISDMLA
DVIERGTGRG VRRVLDRGDL AGKTGTTNDL RDAWFVGYNQ DLVATAWIGF DDQRSLGRGE
TGASAALPIW ARFMSVALDG VEERPMPRPG GLVTVRIDPE SGRATSSENP DAIFETFREE
TVPVRDDSDR RQRGDEHTER ELF
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