| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2247 |
|---|
| Symbol | |
|---|
| ID | 4709498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 2466855 |
|---|
| End bp | 2469038 |
|---|
| Gene Length | 2184 bp |
|---|
| Protein Length | 727 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639856723 |
|---|
| Product | malate synthase G |
|---|
| Protein accession | YP_001003813 |
|---|
| Protein GI | 121999026 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2225] Malate synthase |
|---|
| TIGRFAM ID | [TIGR01345] malate synthase G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.109783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC GGGTTCAAGT CGGTGGCCTG CAGGTGGCGC GTGAACTCCA CGACCTGGTG
GCCAACGAGA TCGTGCCGGG GACCGGCATC GACGCCGACA CCGTGTGGGA CGAGCTCGGC
GGCATCGTCC GCGATCTGGC TCCGCGCAAC CGCGAGTTGC TGGAACAGCG CGAGAACTTG
CAGCGGCAGA TCGACGACTG GCATCGGAAC CATCGTGGCC AGTTCTCGGT ATCCGATCAC
AAGGCGTTCC TTGAGCAGAT CGGCTACCTG GAACCCGAAG TGGACGCGTT CGAGATCACC
ACCACCGGGG TCGACCCGGA GATCGCCACC GTGGCCGGGC CGCAGCTGGT GGTGCCGGTC
GATAACGCGC GATTCGCGCT CAACGCGGCC AACGCGCGCT GGGGCAGCCT GTTCGATGCC
CTCTACGGCA CCGACATGAT CCCCGAGAGC GACGGGCTAG CCAAGGGCAA GACGTACAAT
CCCGCTCGCG GTAAAAAGGT CATGGAGTTG GCCGCCGAGA CCCTGGACGA GGTGGCCCCG
CTGGCCCATG GGCTCCACGC CGAGGTTACC GCCTACCGGC TGAGCGACGG CAACCCGCGC
CAGCTGGTCA TCACCCTGGC CGACGGCAGT GAGACCGAAC TGGCCGATCC GACCCGCTTC
GTCGGCTTCA CCGGCGAGCC GGATCGCCCC GCCACCCTCC TGCTGCGCCA CAACGGCCTC
CACGCCGAGA TCGTCATCGA CCCGAACGAC CCGATCGGTC AGGATCACCC GGCCGGCGTC
AAGGACGTGG TCATGGAGTC GGCGCTGACC GCCATCCAGG ACTGCGAGGA CTCCGTGGCC
GCGGTGGACG CCGAGGACAA GGTGCGCGTC TACCGCAACT GGTTGGGCCT GATGAAAGGC
GACCTAGAGA CGTCGGTGAG CAAGGGCGGC GAGACCTTTA CGCGGCGGCT CAACCCGGAT
CGCACCTACA CGGCCCCGGA CGGCGGCTCG CTGACCCTGC CGGGCCGCTC GCTCATGCTG
GTGCGCAATG TCGGTCACCT GATGACCACA CCGGCGGTCC TCGACGGCGA CGGCAACGAG
ATCCCCGAGG GCATGCTCGA CGCCATGATG ACCGTCCTCT GCGCGGTCCA CGACCTCAAG
GGGCTCGGAC AGGTATGCAA CTCGAAGACC GGCAGCGTCT ACATCGTCAA GCCGAAGATG
CACGGTCCCG AGGAGGTGGC GCTGACCGTG AACCTGTTCG AGCGCGTCGA GGACGCCCTG
GGTCTGGCGC GTGCCACCCT CAAGGTGGGC ATCATGGATG AGGAGCGGCG CACTACGGTC
AACCTGCGTG CCTGCATCCA GCAGGCCCGG GATCGGGTGA TCTTCATCAA CACCGGCTTC
CTCGACCGCA CTGGCGACGA GATCCACACC GCCATGGAGG CCGGCGCGGT GATCCGCAAG
GCGGACATGA AGGGGGCCGC CTTCATGACC ACCTACGAGG ACTGGAACGT CGATGTCGGC
CTGGCTTCCG GCTTCAAGGG CAAGGCCCAG ATCGGCAAGG GCATGTGGCC GAAGCCGGAC
AAGATGCGCG AGATGTTCGA CACCAAGGCT GGCCACCCCA AGGCAGGCGC GAACTGTGCC
TGGGTGCCGT CGCCGACGGC GGCGACCCTG CACGCTGTGC ACTACCACCA GGTGGACGTG
GCTGGCGTCC AGGCCGAGAT CGCCCGGGAG GGGTGGCGTT CCGACCTGAG CCGGATCCTC
ACCGTGCCGC TGGCGCCGAG CACCGACTGG AGCGCCGAGG AGATCCAGCA GGAGGTGGAC
AACAACTGCC AGGGCATCCT CGGCTATGTG GTGCGCTGGA TCGACCAGGG CATTGGCTGC
TCCAAGGTCC CGGACGTCAA TAACGTGGGG CTGATGGAGG ATCGCGCCAC GCTGCGCATC
TCCAGCCAGC ACGTGGCCAA CTGGCTCTAC CACGGCGTGG TGACCGAGGA GCAGGTCATG
GACAGCCTCA AGCGCATGGC CCAGGTGGTC GACGAGCAGA ACGCCGGCGA CCCGAACTAC
CGCCCCATGG CCGAAGACTT CGACGGCAGC GTCGCCTTCC AGGCGGCCTG TGATCTGGTC
TTCAAGGGGC GGGAGCAGCC CTCCGGTTAC ACCGAGCCGG TGCTCCATCG CCGTCGGCAG
GAGGCGAAGG CGAAGTACGC CTGA
|
|---|
| Protein sequence | MSERVQVGGL QVARELHDLV ANEIVPGTGI DADTVWDELG GIVRDLAPRN RELLEQRENL
QRQIDDWHRN HRGQFSVSDH KAFLEQIGYL EPEVDAFEIT TTGVDPEIAT VAGPQLVVPV
DNARFALNAA NARWGSLFDA LYGTDMIPES DGLAKGKTYN PARGKKVMEL AAETLDEVAP
LAHGLHAEVT AYRLSDGNPR QLVITLADGS ETELADPTRF VGFTGEPDRP ATLLLRHNGL
HAEIVIDPND PIGQDHPAGV KDVVMESALT AIQDCEDSVA AVDAEDKVRV YRNWLGLMKG
DLETSVSKGG ETFTRRLNPD RTYTAPDGGS LTLPGRSLML VRNVGHLMTT PAVLDGDGNE
IPEGMLDAMM TVLCAVHDLK GLGQVCNSKT GSVYIVKPKM HGPEEVALTV NLFERVEDAL
GLARATLKVG IMDEERRTTV NLRACIQQAR DRVIFINTGF LDRTGDEIHT AMEAGAVIRK
ADMKGAAFMT TYEDWNVDVG LASGFKGKAQ IGKGMWPKPD KMREMFDTKA GHPKAGANCA
WVPSPTAATL HAVHYHQVDV AGVQAEIARE GWRSDLSRIL TVPLAPSTDW SAEEIQQEVD
NNCQGILGYV VRWIDQGIGC SKVPDVNNVG LMEDRATLRI SSQHVANWLY HGVVTEEQVM
DSLKRMAQVV DEQNAGDPNY RPMAEDFDGS VAFQAACDLV FKGREQPSGY TEPVLHRRRQ
EAKAKYA
|
|---|
| |