| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2242 |
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| Symbol | |
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| ID | 4709160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2456775 |
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| End bp | 2457230 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639856718 |
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| Product | fimbrial protein pilin |
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| Protein accession | YP_001003808 |
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| Protein GI | 121999021 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0233874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACACGT GTATCCGGCG GCGCTGGCGC TGCGCCGCCT TCACCCTGAT CGAGCTGATG
ATCGTGGTGG CCATCATCGC CATGCTGGCG GCCATCGCGG TCCCCCAGTA CCAGAGCTAC
GTCGCTCGCA CCCAGTTCAC CGAGGCGTTG ACCCTGTTCG GTGGGGTGCG CACCGCCGTG
GAGTCCGAGG TCCACCTCCG CGGCGCCGAA GGGGTCAATT CGGATTGGAT CGAGGAGCAG
GTGGGGGACG GCGGTGACTA CATCAACGAC ATCGAGGTGC AGACCAATGC TGGCGACGTC
GAGGTGCAGA TGACCTTCGC GACTCAGGGG GTCAACGCTG AACTGGCCGG TCAGAGCGTG
ACCTTTACGG GCGCGGAATG GGACGAGGGC GGGGCGTGGT CGTGTGATCT CCCCGACGAC
CTGGCGCATG TGGCCACCGG CCTGTGCGCC GAATGA
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| Protein sequence | MNTCIRRRWR CAAFTLIELM IVVAIIAMLA AIAVPQYQSY VARTQFTEAL TLFGGVRTAV
ESEVHLRGAE GVNSDWIEEQ VGDGGDYIND IEVQTNAGDV EVQMTFATQG VNAELAGQSV
TFTGAEWDEG GAWSCDLPDD LAHVATGLCA E
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