| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2238 |
|---|
| Symbol | |
|---|
| ID | 4709162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 2452557 |
|---|
| End bp | 2454173 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639856714 |
|---|
| Product | NAD+ synthetase |
|---|
| Protein accession | YP_001003804 |
|---|
| Protein GI | 121999017 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.695951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG TCGTCGCTCA GCTGCCCTTT CCCGTCGGTG CCTTGGATGA CAACGCCCGG
CGGATCATCG ATGCCATCGG CCGGGCGCGG GACGAGTTCG GGGCCGACTT GGTGGTCTTC
CCCGAGCTGG CCGTCACCGG TTATCCGCCC GACGATCTGC TGCTGCGCAG CGACTTCCAC
GCCGCGGTGG AGCGGGCGCT GGCCCGGATC GCTGCGGCGT GCACGGGCGT CACCGCCCTG
GTCGGGGCCC CGCTGCACCG CCACGGCGTG GTGCGCAATG CCGCCGTGGC CCTGGCCGAC
GGCGCCGAGG TGGGGGCGGC TTACAAGCGC TGCCTGCCGA GTTACAGCGT GTTCGACGAC
AACCGCCACT TCCGTGCCGG CGATGCCCCC TGCCTGCTCG AGGTCGCCGG CCGGCGCATC
GGGGTGGCCA TCTGCGAGGA CATCTGGGCG GCGACGCCGG CCGCCGAGGC TGCAGCGGCC
GGGGCCGAGC TGCTGGTCAG CATCAACGCC TCCCCGTTCC ACGACGGCAA GCAGGCCGAG
CGTGAGGGGG TCGCGGCTCG GCGGGTGGCC GAGACCGGGG TTCCGCTGCT CTACGCCAAC
CTCGTCGGTG GTCACGACGA GGTGGTCTAC GACGGCGGCT CGTTCGCGCT GGACGATACC
GGTGCGCTGA GCGCACGCGC CCCGGCCTTC GCCGACGGGC TGTATGCGCT GGACTGGCAA
GGGGGTGCGC TGCACGGCGA GCAGGCCGAG GCCGTCGAAG GGCCGCCGGC GGTCTACCAG
GCGCTGGTGC GGGCCACCGC CGACTACGTC CGCGGCAACG GCTTCTCCGG CGTTGTGTTG
GGGCTCTCCG GGGGGATCGA CTCGGCGCTG GTGGCCGCGG TGGCCGCCGA CGCGCTGGGC
GGGGATCGGG TGCTGGCGGT CATGATGCCC ACCCGCTACA CCGCCGAGCG CAGCCTGGAG
GACGCCCGGG CGGCGGCCCA GGCCCTGGGG CTGGAGTATC GGAGCATCCC CATCGAGTCG
CTCTTCGCCG ACTACGAGCA GGCCCTGGCC CCCCTCTTCG CCGGGCGGGA GGCGGATGCT
ACCGAGGAGA ACATCCAGGC GCGCATCCGG GGCAACTGCC TGATGGCGCT CTCCAACAAG
CTGGGGTTGA TGCTGCTGGC CGCCGGCAAC AAGAGCGAGC TGGCGGTTGG TTACGCCACC
CTCTACGGCG ATATGTGCGG GGGGTTCGCA CCGCTCAAGG ACGTCTACAA GACTGACGTC
TACCGCCTGG CCGAGTACCG CAATAGCCTG GGGCCTGCCG TGCCCGCCGC CATCATCGAG
CGCGAGCCCA CCGCGGAACT GCGCGCCGAT CAGCGGGACA GCGACAGCCT GCCGCCCTAT
CGGGTGCTTG ATGCCGTGCT GCGCCAGTAT CTGGAGGACG ACGCCGCCGA GCACGAGATC
CGCGTCGAGG GGCTGGACGC GGTGGAGCTG TGCCGGGTGA TCCGGCTGCT CTACCGGAAC
GAGTACAAGC GCCGCCAGGC GGCCCCCGGG GTCAAGGTGA CCCGGCGCGC CTTCGGGCGG
GACCGCCGAT ATCCGATTAC CTCGGGCTGG TCCGGTTGTC AGGGCTGCAG CGACTAG
|
|---|
| Protein sequence | MRIVVAQLPF PVGALDDNAR RIIDAIGRAR DEFGADLVVF PELAVTGYPP DDLLLRSDFH
AAVERALARI AAACTGVTAL VGAPLHRHGV VRNAAVALAD GAEVGAAYKR CLPSYSVFDD
NRHFRAGDAP CLLEVAGRRI GVAICEDIWA ATPAAEAAAA GAELLVSINA SPFHDGKQAE
REGVAARRVA ETGVPLLYAN LVGGHDEVVY DGGSFALDDT GALSARAPAF ADGLYALDWQ
GGALHGEQAE AVEGPPAVYQ ALVRATADYV RGNGFSGVVL GLSGGIDSAL VAAVAADALG
GDRVLAVMMP TRYTAERSLE DARAAAQALG LEYRSIPIES LFADYEQALA PLFAGREADA
TEENIQARIR GNCLMALSNK LGLMLLAAGN KSELAVGYAT LYGDMCGGFA PLKDVYKTDV
YRLAEYRNSL GPAVPAAIIE REPTAELRAD QRDSDSLPPY RVLDAVLRQY LEDDAAEHEI
RVEGLDAVEL CRVIRLLYRN EYKRRQAAPG VKVTRRAFGR DRRYPITSGW SGCQGCSD
|
|---|
| |