| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2235 |
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| Symbol | |
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| ID | 4709165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2450341 |
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| End bp | 2451282 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639856711 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001003801 |
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| Protein GI | 121999014 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.894524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGAC CCCGTCACCA AGCCGCCGTA CCCGAGGGGC TGGCCGGCCA GCGCCTGGAT
CGGGTGCTGG CGGCGCTCTT CCCCGATTAT TCGCGCAGCC GTTTGCAGCA GTGGATCCGG
GCCGGCTGGA TCACCGTCGA CGGCGCGGTC CGCCGGCCCC GCGATCCGGT TCATGCCGGT
GAGCAGATCA GCGTGGACGC CGAGCCCGAA CCGGAGACCC CGCTGGCGCC GGAACCCATC
CCGTTGCGCC TGCTCTACGA GGACGACCAC CTGCTGGTGG TGGACAAGCC GGCGGGCCTG
GTGGTTCACC CGGGGGCGGG CAACCCCGGC GGCACCCTGG TCAACGCCCT GCTCCATTAC
GACCCCGGGC TGGAGGCGCT GCCCCGTGCG GGGATCGTCC ACCGGCTGGA CAAGGAGACC
TCGGGGGTGT TGGTGGTGGC CCGGACCTAT GCGGCACACC ACGCACTGGT GGCGCAGCTT
CAGGCGCGCA CGGTGGGGCG GGGTTACCAG GCGGTGGTCG TCGGGCGCCC CACCGCCGGG
GGGCGAGTGG ACGCCCCCAT CGCCCGTCAC CCGCGGGACC GCAAGCGCAT GGCCGTGGTG
GAGACCGGTC GTCCGGCGGT GACCCACTAC CGCGTTGCCG AGCGGTTCAC GGCCCACACC
CTGCTCGATG TGGAGCTGGA AACCGGGCGC ACCCACCAGA TCCGCGTGCA CATGGCGCAC
TGCCGGCTGC CGTTGGTGGG CGATCCCGTC TACGGGCGCC GGCCGGTCTA CCCCAAGGGG
GCGAGCGAGA CCCTGCGCGC CGTGCTCGAC GGCTTCCGCC GTCAGGCCCT GCACGCTCGG
CATCTGCGCC TTGAGCACCC GCGCACCGGA GAGGCGATGC ACTGGGAAGC GCCGCCGCCA
GACGACTGGG AGCGCCTCTT GGAGGTCCTG CGCCATGGCT GA
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| Protein sequence | MERPRHQAAV PEGLAGQRLD RVLAALFPDY SRSRLQQWIR AGWITVDGAV RRPRDPVHAG
EQISVDAEPE PETPLAPEPI PLRLLYEDDH LLVVDKPAGL VVHPGAGNPG GTLVNALLHY
DPGLEALPRA GIVHRLDKET SGVLVVARTY AAHHALVAQL QARTVGRGYQ AVVVGRPTAG
GRVDAPIARH PRDRKRMAVV ETGRPAVTHY RVAERFTAHT LLDVELETGR THQIRVHMAH
CRLPLVGDPV YGRRPVYPKG ASETLRAVLD GFRRQALHAR HLRLEHPRTG EAMHWEAPPP
DDWERLLEVL RHG
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