| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2228 |
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| Symbol | |
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| ID | 4709522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2441976 |
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| End bp | 2443430 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639856704 |
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| Product | putative circadian clock protein, KaiC |
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| Protein accession | YP_001003794 |
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| Protein GI | 121999007 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction
[COG2874] Predicted ATPases involved in biogenesis of archaeal flagella |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAG GCAATAGCTC AGCGGCGATC GGCGCCCGGC GGCGCGGCGC ACAGACCGCA
CCCACAGGGA TCGAGGGGCT GGATTTCATC CTCGACGGAG GGTTGCCCGA GGGGCAGCCC
ACCCTGCTGC GTGGTGGCCC CGGTGCCGGG AAGACAGCCA TCGCGCTGAC CTTCTTCTGC
CACGGGCTCG AGCAGGGAGA GCCGTCGGTT CTGGCCACCT TCGACGAGTC GCCCGCGGCA
CTGACCCGCC ATGCCGAAGC CTTGGGGTTC CCCCTGGCGG AGCACCTGGC CGCTGGACGC
GGTCGCATCC TCGATATGCG CCCGGATCGC TCCGAGCTGG TCTCCGGCGA GGAGATCGAG
CTGACCGCGC TGCTCGCGCG CATCGGTCAC GCCCTGGACG CCCTCGGTGC CAAGCGCCTC
GTGGTCGACG CCATCGACGG CATGGACGAG AGCTTCGCGC CGGGCAGCAG TCTGCGCGCC
GAGCTGACGC GGGTCTTCGA CTGGATCCGC GAGCGCGATG CCACCACCCT GATCACCTCC
GGCGAACACT CTGGCTTCAG CGAGCGCTTT GGGCTGGAGG ATTACATCGC CGACTGCGTG
ATCCTCCTGC GTCAGGAGAT GTGCGATCGG CGCATGACGC GTCTGCTGCG CATCCTCAAG
CGCCGGGGTG GCAGTCACGG CACCAACGAG TTCCCGTTCC TGCTCGACGG CGAGGGGGTG
TTCCTGGCGC CGATTACCGG AACCCGGCTC GAGGCCTACC CCTCCGCCGA GCGGCATCGT
ACCGGGGTCG CGGGGCTCGA CGCGATGCTC GGCGGGGGCG GACCCTACCG CGGCTCAGCG
GTCATGATCT CCGGGCAGTC GGGTACTGGC AAGACGAGCT TTGCAGCGAC GTTCGCCGGT
GCCGCCTGCG AGGCCGGTGA CAGGGTGCTC TACCTCAGCT TCGAAGAGGC CACCGACGAG
CTGCTGCGCA ACCAGCGCAG CGTGGGCGTG GATCTGGCCC CGCATATCGA AAGCGGCCGG
CTGGTGCTGG AGCCGTTGCT GGCCGTGGAG CTGGGCTGGG AGGAGCACCT GCTGCGGGTG
ATGCGCGCGG TGAAGGAGAA GCTCCCAGCG GTGGTGATCC TGGACCCGGC GAGCGCCATG
AGCGATCGCC AGAAAGATCG TCAGGGCAAG GAGATGCTCC TGCGGTTATT CTATATGCTC
AAGCGCGAGG GCGTGACGGT CGTGGCGACG GAGCTGTTGC CTGACTACAG TGACGGCTTC
AGTACGATGG ACGTCTCTTC CATCGTGGAT GTGTGGATCA AGTTGCGTCG CGACGAGCGG
GACGGCAAGC TGCGGCGCTT GTTGAACGTG GTCAAGGCTC GCGGCCTGCC GACCTCGGAC
CGGATTCAGG AGTACTACCT CTCCAGCGAC GGGGTACACG TGGTCAACAC TGCCGATACG
GGAGACGGGT CGTGA
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| Protein sequence | MAQGNSSAAI GARRRGAQTA PTGIEGLDFI LDGGLPEGQP TLLRGGPGAG KTAIALTFFC
HGLEQGEPSV LATFDESPAA LTRHAEALGF PLAEHLAAGR GRILDMRPDR SELVSGEEIE
LTALLARIGH ALDALGAKRL VVDAIDGMDE SFAPGSSLRA ELTRVFDWIR ERDATTLITS
GEHSGFSERF GLEDYIADCV ILLRQEMCDR RMTRLLRILK RRGGSHGTNE FPFLLDGEGV
FLAPITGTRL EAYPSAERHR TGVAGLDAML GGGGPYRGSA VMISGQSGTG KTSFAATFAG
AACEAGDRVL YLSFEEATDE LLRNQRSVGV DLAPHIESGR LVLEPLLAVE LGWEEHLLRV
MRAVKEKLPA VVILDPASAM SDRQKDRQGK EMLLRLFYML KREGVTVVAT ELLPDYSDGF
STMDVSSIVD VWIKLRRDER DGKLRRLLNV VKARGLPTSD RIQEYYLSSD GVHVVNTADT
GDGS
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