Gene Hhal_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2223 
Symbol 
ID4709529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp2437229 
End bp2437684 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content68% 
IMG OID639856699 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001003789 
Protein GI121999002 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.339527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTGA CCTACTACAC CGACTACGCC CTGCGTGTGC TCCTCTATGC GGGCGCGCAG 
GGGGAGCGGC GGGTGCCCAT GCGGGAGATC GCCCGGGCCT ACGGGATCTC CCAGGATCAT 
CTGCGCAAAG TGGTCCATCG CCTGGCCCGC CACGGCTATC TTCAGACGAC CCAGGGGCGG 
AGCGGAGGAT TGCGGCTCGG CTGTGCACCG GGCGCGATCC GCGTGGGCGA TGTGGTGCGT 
CTTATGGAGG ACAGCCTGGA GCTGATCCAC TGCGACCGTG GCCCCTGCCC CCTGTGCGGA 
CACTGCTCCC TGAAACGGGC CCTGAACGGC GCCCGGGATC AGTTCATCCA GCATCTCGAC 
GGCGTGACCC TGGAAGAGTT GCTCGCCGAT CCCGGTACCG CGCAGCAACT CCGGCGCCTG 
TCCCAGGACG ATCCGCTGCC CACCTCCAAC GGCTGA
 
Protein sequence
MELTYYTDYA LRVLLYAGAQ GERRVPMREI ARAYGISQDH LRKVVHRLAR HGYLQTTQGR 
SGGLRLGCAP GAIRVGDVVR LMEDSLELIH CDRGPCPLCG HCSLKRALNG ARDQFIQHLD 
GVTLEELLAD PGTAQQLRRL SQDDPLPTSN G