| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2217 |
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| Symbol | tolB |
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| ID | 4709189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2431166 |
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| End bp | 2432476 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639856692 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001003783 |
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| Protein GI | 121998996 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCGAC TGAAACGAGT ATGGAGCACC CTCTACCTGG CAGCCCTGCT ATCGCTGCCG
GCCCATGCCA GTGCCGATGA CGATCTGGTG ATCGACATCA TCGGCGGTAT CGAGGGCGCC
ACCCCCATCG CCATCGTGCC GTTCCAACGG GCCGAGGGGG CCGACCCGGA GACCGAACTC
GCGCCGATCA TCACGGCCAA CCTGGCCCGT ACGGGCCGCT TCGACATCCT GCCGGAGGAG
GACCTGGTCG ACACCCCGGG GCGCATGGAG GATGTGCGCT TCTCCACCTG GCGGGCCCAG
GGGGTGGATC ACCTGGTGGT GGGCGGGATC GATGACGCCG GAGACGGCCG CTACGAGGTG
CGCTTCGAGG TCCTCGACGC CTTCCAGGGG CAGCGCACCG ACGGCCGGCG CTACCGCGCC
GAGGAGCGCC ACCTGCGCAC CCTCGCCCAC ACCATCTCCG ACCGCATCTA CGAGACCATC
ACCGACCGTG AGGGCACCTT CACCAAGCGG ATCGCCTACG TGGCCGTGGA GCAGCGCGAG
GACGGCGAAG GTCGCCGCCA CCGACTGGTG GTGGCCGACT CCGACGGGCA CCGGCCGCAG
ACCATCCTGA CCTCCGACGA ACCACTGCTC TCCCCGGCGT GGTCACCGTC GCGGGACCGG
CTGGCCTACG TCTCCTTCGA GGGCCGCCGG TCGGAGGTCT TTGTCCAGGA GATTCGCACC
GGCGAGCGCG AGCGGGTGGC CAGCTTCCGC GGTATCAACA GCGCACCGGC GTGGTCGCCG
GACGGGGACC AACTGGCGGT GACCCTCTCC CGCGACGGCG CCGCCAACAT CTACCTCATC
GACGTGGCCA GCGGCGATGT CCGGCCCCTG ACCGATCACT GGGCCATCGA CACCGAGGCC
ACCTGGGGCC CGGACGGCGA CTGGATCTAT TTCACCTCGG ACCGGGGCGG ACGGCCGCAG
ATCTACCGCA CCCCCCCGGA CGGCAGCGAG ACCGAACGGG TAACCTACGA CGGGGCGTAC
AATGCCCGGC CGAGCATCTC GCCCGACGGC GAGCGCATGG CCATGGTCCA CCGCCACGAC
GGCCAGTACT ATATCGCTCT GCAGGACCTA GACACCGAGG CGGTGCAGAT CATCAGCGAC
GGCCCGGCCG ACGAGTCGCC GAGCTTCGCC CCCAACGGCG ATCTGGTCAT CTACACCACC
GGCGACACCG AGGGGCAGCG ACTGGCGACC GCCTCGGTCA TCGGCGGTGC GGTGGCCCCG
CTGGAGTCCA CCGAAGAACC GAATACCCGC GTACGCGAAC CGGCCTGGTA A
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| Protein sequence | MTRLKRVWST LYLAALLSLP AHASADDDLV IDIIGGIEGA TPIAIVPFQR AEGADPETEL
APIITANLAR TGRFDILPEE DLVDTPGRME DVRFSTWRAQ GVDHLVVGGI DDAGDGRYEV
RFEVLDAFQG QRTDGRRYRA EERHLRTLAH TISDRIYETI TDREGTFTKR IAYVAVEQRE
DGEGRRHRLV VADSDGHRPQ TILTSDEPLL SPAWSPSRDR LAYVSFEGRR SEVFVQEIRT
GERERVASFR GINSAPAWSP DGDQLAVTLS RDGAANIYLI DVASGDVRPL TDHWAIDTEA
TWGPDGDWIY FTSDRGGRPQ IYRTPPDGSE TERVTYDGAY NARPSISPDG ERMAMVHRHD
GQYYIALQDL DTEAVQIISD GPADESPSFA PNGDLVIYTT GDTEGQRLAT ASVIGGAVAP
LESTEEPNTR VREPAW
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