Gene Hhal_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2216 
Symbol 
ID4709534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2430212 
End bp2431162 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content71% 
IMG OID639856691 
ProductTonB domain-containing protein 
Protein accessionYP_001003782 
Protein GI121998995 
COG category[S] Function unknown 
COG ID[COG5373] Predicted membrane protein 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTGGC TGAGAGAGCG AGCCCCGAAG CTGCCGAGCC GGCTGGCGAG CAGTCCGTCG 
CGTTTTGTGA TCTACTCCAC CCTGGGCCAC GTGGCCGTGT TCACCTTGGT GGGCGCCAAT
TTCGCGACCT GCACCCGAAC ACCGGAGCCC CCCGAGTTCG AAGGCCCCAT CATCGAGGCC
ACGACGGTCG ACAGTGCCGC GGTGGAGGCC GAGATGGAAC GGCGCCAGGA GCCAGAGCCC
GAACCGGAGC CAGAGCCCGA GCCGGAACCC GAGCCGGAAC CGGAGCCGGA GCCGGAACCC
GAGCCGGAGC CCGAGCCCGA GCCAGAGCCA GAGCCCGAAC CGGATCCGGA GCCGGAACCC
GAGCCCGAAC CGGAGCCGGA ACCCGAGCCG GAACCCGAGC CCGAACCGGA GCCGGAGCCA
GAGCCAGAGC CAGAGCCGGA ACCGGAGCCG GAGCCAGAGC CCGAGCCCGA GCCCGAGCCC
GAGCCCGAGC CCGAGCCCGA GCCGGACCCT GCCGAACAAC GGGCCGAGGA GCAAGACCGA
CTGCGCGAGG AGATTCGCCA GCGCATGGAG GAAGAGCGCG AAGCGCAACG CCAGCAAGAA
CTGGAGGCGG AGCGCCAACG CCAGGAGGCG GCCCAGCAGG AGGCTGAGGA ACAGCGCCGC
CTGCAGGGGC AGCAACAGCG TTACACCGCG GCGATCGCCG AGGCCGTCGA GCGCAACTGG
CGACGCCCCA CCGGCACGCC CGAAGGCCTT GAGGCCGTGG TTCGGGTCTC GTTCTCGAGC
AGCGGGGACG TGCGGCGGGT CGAGGTCGTC AGCGGCAGCG GCGATTCGGG CTTTGATCGC
TCCGTCGAGC GTGCCGTGCA GGCCGCCTCG CCGGTCCCCT TCCCGGACGA GGCCGCACTG
CAGGAGCGCA TGCAGACCCT AACCTTCCGC TTCGCACCGG ACCGGAGTTG A
 
Protein sequence
MRWLRERAPK LPSRLASSPS RFVIYSTLGH VAVFTLVGAN FATCTRTPEP PEFEGPIIEA 
TTVDSAAVEA EMERRQEPEP EPEPEPEPEP EPEPEPEPEP EPEPEPEPEP EPEPDPEPEP
EPEPEPEPEP EPEPEPEPEP EPEPEPEPEP EPEPEPEPEP EPEPEPEPDP AEQRAEEQDR
LREEIRQRME EEREAQRQQE LEAERQRQEA AQQEAEEQRR LQGQQQRYTA AIAEAVERNW
RRPTGTPEGL EAVVRVSFSS SGDVRRVEVV SGSGDSGFDR SVERAVQAAS PVPFPDEAAL
QERMQTLTFR FAPDRS