Gene Hhal_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2210 
Symbol 
ID4709198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2426010 
End bp2426753 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content68% 
IMG OID639856685 
Producthypothetical protein 
Protein accessionYP_001003776 
Protein GI121998989 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGAC ACAGCAAGTG GGCCAACATC AAACGCCACA AGTGGGCGCA GGACGCCAAG 
CGGTCCAAGA TCTTCACCAA GCATATCCGC GAGATCACCG TCGCGGCACG CCTCGGCGGC
CCCGACCCGG AGATGAACGC CCGGCTCCGG CTGGCCCTGG ACCGCGCCTT TGCGGTGAAC
CTTCCCAAGG ACCGCGCCGA CGCCGCCATC AAGAAAGGCG CCGGCCTGGA GGAGGCGGAG
GCCTACGAGG AGATCCGCTA CGAGGGCTAC GGCCCCGGCG GCTCGGCGAT CATGGTCGAC
TGCATGACCG ACAACCGCAA CCGCACCGTC TCCGAGGTGC GCCACGCCTT CAGCAAGCAT
GGCGGCAAGA TGGGCACCGA CAACTCGGTG GCGTATCTCT TCCAGGAGCG CGGGGTGCTG
GTCTTCGCCC CGGGCACCGA CAGCGACCAG GTGCTGGAAG TCGCCCTGGA GGCCGGCGCC
GACGATCTGG TCGAGAACGA TGACGGGTCG CTGGAGGTCC TGACCACGCC AGAGGCCTAC
CGCGGTGTGC GGGATGCGCT GACCGAGGCC GGCCTGGAGC CCGAGCAGGC GGATGTCACC
CAGCGCCCGG ACCTCACCGT CCAGATCGAG GGCGACAACG CCGTCAGCAC CGCCCGGCTG
ATCGAGCGCC TGGAGGACCT GGACGACGTG CAGCACGTCT ACACCAACGC CGACCTGCCG
GCGGAGGCCT ACGAAGAAGG CTAG
 
Protein sequence
MAGHSKWANI KRHKWAQDAK RSKIFTKHIR EITVAARLGG PDPEMNARLR LALDRAFAVN 
LPKDRADAAI KKGAGLEEAE AYEEIRYEGY GPGGSAIMVD CMTDNRNRTV SEVRHAFSKH
GGKMGTDNSV AYLFQERGVL VFAPGTDSDQ VLEVALEAGA DDLVENDDGS LEVLTTPEAY
RGVRDALTEA GLEPEQADVT QRPDLTVQIE GDNAVSTARL IERLEDLDDV QHVYTNADLP
AEAYEEG