| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2209 |
|---|
| Symbol | |
|---|
| ID | 4709197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 2424196 |
|---|
| End bp | 2425929 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639856684 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001003775 |
|---|
| Protein GI | 121998988 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC AAGGCCATGC GGCATTCTAC GATGCCCGTC CCTGGGAGCG CTGCTACGGT
ACCCCCCCCG ACCAAGAGCC GATGCTGCAG GAACTGGGCA CCGTGGCGGA CATCGCCCGT
CGGCGGGCCG AGCAGAGCCC GCACCTGCCG GCGTACACCG CCTGCCTGGA GAATGGCCTG
AACGCCACCC TGGATTTTGC CACCGTCGAC CGCCTGGCTG ACTGCTTCGC CGCCTGGCTG
ATGACCGAGG CCGGGATCCG CCCCGGCGAC CGGGTGGCGG TGCAGATGCC CAACGCCCTG
CCCTACCCGG TCGCCGTCTT TGGCACGCTG CGTGCCGGCG CGGTCCTGGT GAACATCAAC
CCCCTCTTCA CCCCGCGGGA GATGCAGCAC CAACTGCAGG ACAGTGGCGC GCGCGTCCTG
GTCATCGTCG ACCTGTTTGC CGACAAGCTC CCCGGCGCGC TAACCGGGAC CGCCGTCGAG
GAGGTGGTCC TGAGCGGGGT TGCCGACCTC TTCCCCTGGC TTAAGCGCGG CCTTGTTCAC
GGCGTCCTGC GCGCCAAGCG GGAGATCCCG GCCTCGCCGC AGGGCACGCG CCGGCTCGGA
GCGGTGCTGG CCCGCGGCGA GCGGCTGGGC CCGCAGCCTT GGCCCGAGCG CAGTCCCGAC
GACCTGGCCC TGCTGCAGTA CACCGGCGGC ACCACCGGAC TGCCCAAGGG GGCCGAGTTG
CGCAACCGCA ACATCCTCGC CAACCTCGAG CAGATCAAGC GGGTGGCCGG CGACGCCATC
CGCCCGGGCG AGGACGTGGT GCTGACCGCG CTCCCGCTCT ACCACATCTT CGCCTTCACC
TTTAACTTAC TCACCTTCCA CCACTACGGC TGCCGGAATA TCCTGTGCCC CTCACCGCGC
CCGGTGGACA AGCTCCGCAA GGCCTTCGAA CAGTTCCCGG TGAGCAAGTT CTCGGCGGTC
AATCTGCTCT TCTACGGCCT CCTGCAGGCG GAGTGGTTCC AGAAGAACCC GCCGCAGCAC
CTGGACTTCG CCATCGCCGG CGGCACCGCC CTGCACCGCA GCACCGCCGA ACAGTGGCAG
TCGCTGCTCG GCCACACGCC CCTCGAGGGG TACGGCCTCA CCGAGACCAG CCCGGTCCTG
GCGGTGAACC CGCCCCACGG CGAGAACCGC CTCGGCAGCG TTGGCGTTCC GCTCCCCGGG
ACGGATGTGC GCATCGTCGA CGATGACGAC AGGCCCGTCC CCCAAGGTCA GACCGGCGAG
ATCGTCGGCC GCGGCCCCCA GGTCTTCGAG GGCTACTGGC AGCGCCCCGA GGAGAATCGC
CAGACGCTGC GCGGCGGCTG GTTCCACACC GGCGACATCG GCTACATGGA CCCCGATGGC
TACATCTACA TCGTCGACCG CAAGAAGGAC ATGATCGACG TCTCCGGCTT CAACGTGTAC
CCCAACGAGG TCGAAGAGGC GCTGGCCGAG CACCCGGCCG TGGCCGAGGT CGCCGTGGTG
GGCGCACCGC GCGGAGAGGC CGGGCAGGCG GTGATCGCCT TCGTGGTCAC CCCCGAACAG
CAGGAACTCG CCGAGTCGGA GCTGCTCGAC TTCGCCCGAC AGCAGTTGAC CCATTACAAG
GTCCCCCGCC GGGTGGTATT CCGCGACGCG TTGCCCAAAT CGGCGGTGGG CAAGCTGCTG
CGACGGGATC TGCGCGAGGA GGCTCGGGCC ATCGTCGAGG CGAGCGGGGC GTAA
|
|---|
| Protein sequence | MTDQGHAAFY DARPWERCYG TPPDQEPMLQ ELGTVADIAR RRAEQSPHLP AYTACLENGL
NATLDFATVD RLADCFAAWL MTEAGIRPGD RVAVQMPNAL PYPVAVFGTL RAGAVLVNIN
PLFTPREMQH QLQDSGARVL VIVDLFADKL PGALTGTAVE EVVLSGVADL FPWLKRGLVH
GVLRAKREIP ASPQGTRRLG AVLARGERLG PQPWPERSPD DLALLQYTGG TTGLPKGAEL
RNRNILANLE QIKRVAGDAI RPGEDVVLTA LPLYHIFAFT FNLLTFHHYG CRNILCPSPR
PVDKLRKAFE QFPVSKFSAV NLLFYGLLQA EWFQKNPPQH LDFAIAGGTA LHRSTAEQWQ
SLLGHTPLEG YGLTETSPVL AVNPPHGENR LGSVGVPLPG TDVRIVDDDD RPVPQGQTGE
IVGRGPQVFE GYWQRPEENR QTLRGGWFHT GDIGYMDPDG YIYIVDRKKD MIDVSGFNVY
PNEVEEALAE HPAVAEVAVV GAPRGEAGQA VIAFVVTPEQ QELAESELLD FARQQLTHYK
VPRRVVFRDA LPKSAVGKLL RRDLREEARA IVEASGA
|
|---|
| |