Gene Hhal_2197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2197 
Symbol 
ID4709551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp2411692 
End bp2412291 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content70% 
IMG OID639856672 
Producthypothetical protein 
Protein accessionYP_001003763 
Protein GI121998976 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.169608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGGGCC GGGTCGCCAA TGGCGCCCGC TGGGTCCTGG TGGCGGTGCT CGCCACCGGG 
CTGCTGGGCG CCTGTGCCAC GGACCCGCTG ACCCGCGACG AGGCCGAATA CCCGGATCAC 
CTCGTCATCC CGCCGGATCT GGTCGGTGAG CCCGAGCTCG CCGAGGATGA TCCAGTGCCT 
CCGGAGCCGG ATGCCGACGC CGAGCTGCCG GTGGAGGTCG AGCGTACCAT CCCGTCCCGG 
CTCACCGACG TCGACGGAGA TCCCCGGCTG GCGCTGGACA TGGGCATCAA CCAGGCGTGG 
ATGGGTACCG GGGCCGCCCT CAACCGGCTC GATTTCACCG TCCTGGAGCG CCAGCGCGAC 
GACCTCTACT ACCTGATCCG CTACGAGCCA CGGGCCGATG AGCAGATCGA GCAGCCCGGC 
CTGTTCGCGC GCTGGTTCGG TGGCGCCGAA CGGATCGACA CTTCGCCCCA GCGCTTCCGT 
ATCCAGATCG GCCGCGACAA CGGGCAGGTC GTGGCCAAGG TCCGCGATGA GAACGGCGAT 
CCAGCCGCGG AAGCGGTGGC GGAACGGCTC CTGACCCTGC TCGATCGCCA GCTCTACTGA
 
Protein sequence
MRGRVANGAR WVLVAVLATG LLGACATDPL TRDEAEYPDH LVIPPDLVGE PELAEDDPVP 
PEPDADAELP VEVERTIPSR LTDVDGDPRL ALDMGINQAW MGTGAALNRL DFTVLERQRD 
DLYYLIRYEP RADEQIEQPG LFARWFGGAE RIDTSPQRFR IQIGRDNGQV VAKVRDENGD 
PAAEAVAERL LTLLDRQLY