Gene Hhal_2188 details

Gene Information

• Locus tag: Hhal_2188
• ID: 4709214
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 2401013
• End bp: 2401483
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639856663
• Product: heat shock protein Hsp20
• Protein accession: YP_001003754
• Protein GI: 121998967
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0071] Molecular chaperone (small heat shock protein)

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.345525
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACTCA TGCGTTACGA CCCCTGGAGC ACACTGCGCG ACCTGCAGAG CGACCTGGAC 
CGGATCTTCG CCCCGGGCTC GGCTCGCCCT GGCGCGCTGG CGCGGGCCGG CGAGGACAAC 
GGCGAGACCG CCAGCAATTG GCTGCCGGCC GTGGACATCC GCGAGGATGA GCAGAACTAC 
GTGGTCCACG TCGACCTGCC CGGCGTCTCC CCCGAGGAGA TCGATGTGGC CATGGACAAC 
GGCATGCTGA CCATCAAGGG TCAGCGCGAG TCGGAGGAGA CCGAGAGCGG CGCCAACTGG 
AAGCGCCTGG AACGGGTCCG TGGCACCTTC TTCCGCCGCT TCACGCTGCC GGACAACGTG 
GACTCGGAGG GGATCCAGGC CCGCGCCCGC AATGGCGTCC TGGAGGTCAC GGTACCCAAG 
CGCCAGGAAG AACCGGCCAA GCGCATCCAG GTGCAGGCGG CCGACGAGTA A 

 

Protein sequence

MTLMRYDPWS TLRDLQSDLD RIFAPGSARP GALARAGEDN GETASNWLPA VDIREDEQNY 
VVHVDLPGVS PEEIDVAMDN GMLTIKGQRE SEETESGANW KRLERVRGTF FRRFTLPDNV 
DSEGIQARAR NGVLEVTVPK RQEEPAKRIQ VQAADE