Gene Hhal_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2187 
Symbol 
ID4709213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2400027 
End bp2400929 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content63% 
IMG OID639856662 
ProductIon transport protein 
Protein accessionYP_001003753 
Protein GI121998966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGCGG GTTTGGCTTT TTCAAGTGAC CGGGGCTCGG GGGCGCGCTC CCCGATCAGG 
GAATGGCACG CGCGTCTGCA GGGGCTGGTT GAGGCGCGGC TGTTCCAGAA CACGGTCATT
GCCGTGATTT GCATCAACGG CGTCACCCTG GGGCTGGAGA CCTCGGACGA TCTGGTGGCG
TGGAGTCGTG GGGCCATCCC GCTGATCAAC GAACTCATCC TCGCCTTCTT CGTCGTCGAG
ATCGCGCTGC GGGTCGTGGC CTGGGGGCCA CGTTTCTTCC GAGGGCCCTG GAACCTCTTC
GACTTCGGCA TCGTGGCGAT CTCCCTGGTC CCCGACGCCG GCGCTTACTC GGTGCTCCGC
GCGCTGCGCA TCCTGCGCCT GCTGCGGCTG CTCTCCCAGG TCTCCCGGCT GCGCATCATT
GTCGAGTCGC TGCTGCGCGC CCTGCCGGGC ATCGGCTGGA TCGGGGTGCT GCTCGGGCTG
GTCTACTACG TCTTTGCCGT GATGGGCACC GAGCTCTACG GCAACACCTT CCCCGACTGG
TTTGGCAGCA TCGGTGCGAG CATGTACACC CTGTTCCAGG TGATGACGCT GGAGAGCTGG
TCAGAGGCCA TCGCCCGCCC GGTGATGGAG GAGTACACCG GGGCGTGGTT CTACTTCGTA
GCCTTTATCC TGGTGTCGGC GTTTACCGTT CTGAACCTTT TCATCGGTAT CATCGTCAAT
AGCATGCAGT CCCTGCACTG GGAAGAAGAG GAAGAGAAGC GGGTCGCCTC CGAGGAGAAG
GCCCACAACG AGCGCGAAGA GATGCTTCAC CACCTGCGCG AACTGCACGC CAAGGTCGAT
AAGCTGGAGC AACGGATCCA AGCAGACGGA GCAAGTCATG GAAACGGTCA GAATCCGGAT
TGA
 
Protein sequence
MEAGLAFSSD RGSGARSPIR EWHARLQGLV EARLFQNTVI AVICINGVTL GLETSDDLVA 
WSRGAIPLIN ELILAFFVVE IALRVVAWGP RFFRGPWNLF DFGIVAISLV PDAGAYSVLR
ALRILRLLRL LSQVSRLRII VESLLRALPG IGWIGVLLGL VYYVFAVMGT ELYGNTFPDW
FGSIGASMYT LFQVMTLESW SEAIARPVME EYTGAWFYFV AFILVSAFTV LNLFIGIIVN
SMQSLHWEEE EEKRVASEEK AHNEREEMLH HLRELHAKVD KLEQRIQADG ASHGNGQNPD