Gene Hhal_2184 details

Gene Information

• Locus tag: Hhal_2184
• ID: 4711125
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 2396962
• End bp: 2397444
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639856659
• Product: single-strand binding protein
• Protein accession: YP_001003750
• Protein GI: 121998963
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAGCA GAGGCGTCAA CAAGGTCATC CTGATCGGCA ACCTGGGGAG GGACCCCGAG 
GTCCGTTACA CCGCGTCGGG CAGCGCGGTG GCCAACGTCG CCCTGGCGAC CTCGGACACC 
TGGCGCGACC GTCAGACCGG TGAACAGCAG GAGCGCACCG AGTGGCATCG CGTGGTCATG 
TTCAACCGCC TCGGCGAGAT CGCCGGCGAG TACCTGCGCA AGGGCAGCAA GGTCTACATT 
GAAGGCCGCC TGCAGACGCG CAAATGGCAG GACCAGAACG GCCAGGACCG GTACACCACG 
GAGATCGTCG CCAACGAGAT GCAGATGCTC GACAGCCGCG GCGGTGGGGG CGGTGCCGCG 
CCCATGGGCG GCGGCGGCGA CCAGCGCCCG GCTCAGGCCC CGGCCGGCGA CGCCGGTGGT 
GGCAGTGGCG GCGGCGGCAT GCAGGAAGCC CCGGCGGATT TCGACGACGA TATCCCATTC 
TGA 

 

Protein sequence

MASRGVNKVI LIGNLGRDPE VRYTASGSAV ANVALATSDT WRDRQTGEQQ ERTEWHRVVM 
FNRLGEIAGE YLRKGSKVYI EGRLQTRKWQ DQNGQDRYTT EIVANEMQML DSRGGGGGAA 
PMGGGGDQRP AQAPAGDAGG GSGGGGMQEA PADFDDDIPF