Gene Hhal_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2171 
Symbol 
ID4709791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2383210 
End bp2383773 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content70% 
IMG OID639856646 
Productisochorismatase hydrolase 
Protein accessionYP_001003737 
Protein GI121998950 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGACA CCCTGATCGA CCCGGCGCGC AGCGCCCTGC TACTGGTGGA CCTGCAGGAG 
CGGTTGCTGC CGGCGATAGA CGGCGGCGAG CAGGTGGTCG CCGCGGCGGA CTGGTTGGCG
GGGGTTGCGC ATGAGCTCGA GCTGCCGATC CACGCCACGG AGCAGTATCC GGAGCGACTG
GGGGCCACCG CGGGCCCGGT GGCCCGCTGG GTGCCGGCAT CGCAATGCCA TACCAAGATG
CACTTCTCCT GGGCCCAGGA CCCCAGCCGT GCGGGTGTCC GCCTCCCCGA GCAGGTGATC
ATCGCCGGCA CGGAGGCCCA CGTCTGTGTC CTGCAGACGG CTCTGGGTCT GCAGCAGTTG
GGCCATCAGG TGTTTGCTGT GGCCGAGGCG GTGGGTTCGC GGCGTGCCGC TGATCGCGAC
TTGGCCCTGG CCCGCATGCG CCAGGCCGGC GTGGTGATCG TGGGTGCCGA GATGGTCGCC
TTCGAGTGGC TCCAGCGCGC CGGGACCGAA ACGTTCCGGC GCTTGTTGCC GTGCCTGCGC
GAAGGTTGGC AACCCACTGC GTGA
 
Protein sequence
MTDTLIDPAR SALLLVDLQE RLLPAIDGGE QVVAAADWLA GVAHELELPI HATEQYPERL 
GATAGPVARW VPASQCHTKM HFSWAQDPSR AGVRLPEQVI IAGTEAHVCV LQTALGLQQL
GHQVFAVAEA VGSRRAADRD LALARMRQAG VVIVGAEMVA FEWLQRAGTE TFRRLLPCLR
EGWQPTA