| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2167 |
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| Symbol | |
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| ID | 4709712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2379876 |
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| End bp | 2381987 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639856642 |
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| Product | CheA signal transduction histidine kinases |
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| Protein accession | YP_001003733 |
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| Protein GI | 121998946 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0949772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTAG ACCTGAGCCA GTTCCTGCAG ACCTTCTTCG AGGAGAGCTT CGAGGGGCTG
GATACCATGG AGTCGGGCCT GCTGGAACTC GATCCAGAGA GCCCGGATCC CGAGGCCCTC
AACAACGTCT TCCGCGCGGC CCACTCCATC AAGGGGGGCG CCGGAACCTT CGGTCTCAGC
GCGGTCTCGG ACTTCACCCA CCGCATGGAG ACCCTGCTCG ATCGACTGCG TGACGGCAAA
CAGGCGGTTA CGCCCGACTG CGTCAATGTG TTGCTGAATG CCGTCGATTG CCTGCGAGGC
ATGCTGGTGG CGATCCAGAG TGACCAAACC CTGGACGCCG ACGCGATCAG CACTGCCCAG
CAGCGGCTCG ACGAGCAGCT CGGGCAGGCA CCCGTGGGCG GTGGGGGGGC GACCGGCGCC
GCGGCCGGAC CGACAGCCGG CGGCGGTGAT GCCGGCGGTG ACGATGCGCC GCCGCCCCGC
GGGGGAGGCG GCGGCGGCGG CTGGTTGATT CGCTTCGAGC CGCAGCCCCA CCTGTTCGCC
ACGGGCAACG ACCCGCGTCG GCTCTTCTTG GCCCTCCAGG ATCTCGGCGA GCTTGAGGTC
GAATGCGACA CCTCGGGTTT GCCGCCCTTC GAGCAGCTCG ATCCGGAAAC CTGTCAGCTG
GCTTGGACCC TGCGCCTCTA CGCCGACGTG CCCGAGGCGG CGGTGCGCGA GGTCTTCGAG
TGGGTCGAGG ACGATGCCCG GCTCGAGATC CAGCCCCTGG AGGCCGCAGG TACCGAGGAG
GTAGCTCCGG TAGCACCCGG GCAGCCCCCG ATGCCGACCT CTGAGGAGAG TGGCCCTGCG
GCGCCCGCAG CCGGCGGTGG CGAAGCGCGC AAGCCGGCCG CACGCCGTGG GGGAGGGAAT
AGCTCCATCC GGGTGGATAC CGAGAAGATC GACGCCCTCA TCGATATGGT CGGTGAGCTG
GTGATCACCC AGTCGATGCT CAGCCAGGTC GGCAAGGAGT TCACCGCCGA GCGCCTGGAA
GAACTCCAGG ACGGCCTGGC GCAGCTCGAG CGCAACACGC GCGAACTGCA AGAGAACGTC
ATGCGCATCC GCATGGTGCC AATCAGCTTC GCCTACTCGC GGCTGCCGCG CATCGTCCAC
GACACCAGCC GCGCCCTGGG CAAGGCCGTC GACTTCCAGA TGGAGGGCGA GCAGACCGAG
CTGGACAAGA CGGTGATGGA GAAGATCATC GATCCGCTGG TCCATCTGGT CCGCAACAGC
GTCGACCACG GCATCGAGCC GCCGGAGGAG CGGGCCGCTG CCGGCAAGCC CGAGACCGGC
ACCATCACCA TCGAGGCCTA CCACAAGGGC GGCAATATCA TCATCGAGAT CGCCGATGAT
GGTCGCGGCA TCAATCGCGA CAAGCTGCTG GCCAAGGCGC GCAGCTCCGG GCTGCTCGAG
GACGGCACCG AACTGCCCGA TGACCAGGTC TTCGACCTGA TCTTCCATCC CGGGCTCTCC
ACTCATGAGC AGGCCACCGA ATACTCCGGC CGGGGTGTGG GGATGGATGT GGTCAAGCGC
AACGTCCGCT CCCTGTCCGG CAATATCCAT GTGCGCTCAG CTCAAGGGCA GGGCACGACC
ATCACCATCT CGCTGCCGCT GACCCTCTCG ATCCTGGACG GCCAGCTGTT CCGGGTAGGC
GACCAGACCT ACATCGTGCC GCTGGTTTCG GTCATCGAGT CGCTCCAAGT CGACGGCAGC
AAGCTCAGCC GGGTTACCGG CCGGGGCGAG GTCTACCACT GGCGCGAGGG GTACGTCCCC
ATCGTGCGCC TCCACGAGCT CTTCGACACC GAACCGGTTC GCCGCGAGCT CGCCGGTGGG
CTGATGGTGA TCGTCGAGGA CGAAGACACC TACCTGGGAG TCTTTGTCGA CGACCTCCTT
GATCAGCAGC AGGTGGTCAT CAAGAGCCTG GAGGCCAACT ACCTGCAGGT GCCCGGCATC
GCTGGCGCCA CCATCCTCGG CGACGGCACC GTGGCCCTGA TCCTCGATAT CGCCGGGCTC
ATCGAGATGA GCCGCGGTGG CCGTCGTCAG CCCTACATCC CCACCCCGGA GGACAGCGAT
GAGGCCGCCT GA
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| Protein sequence | MSVDLSQFLQ TFFEESFEGL DTMESGLLEL DPESPDPEAL NNVFRAAHSI KGGAGTFGLS
AVSDFTHRME TLLDRLRDGK QAVTPDCVNV LLNAVDCLRG MLVAIQSDQT LDADAISTAQ
QRLDEQLGQA PVGGGGATGA AAGPTAGGGD AGGDDAPPPR GGGGGGGWLI RFEPQPHLFA
TGNDPRRLFL ALQDLGELEV ECDTSGLPPF EQLDPETCQL AWTLRLYADV PEAAVREVFE
WVEDDARLEI QPLEAAGTEE VAPVAPGQPP MPTSEESGPA APAAGGGEAR KPAARRGGGN
SSIRVDTEKI DALIDMVGEL VITQSMLSQV GKEFTAERLE ELQDGLAQLE RNTRELQENV
MRIRMVPISF AYSRLPRIVH DTSRALGKAV DFQMEGEQTE LDKTVMEKII DPLVHLVRNS
VDHGIEPPEE RAAAGKPETG TITIEAYHKG GNIIIEIADD GRGINRDKLL AKARSSGLLE
DGTELPDDQV FDLIFHPGLS THEQATEYSG RGVGMDVVKR NVRSLSGNIH VRSAQGQGTT
ITISLPLTLS ILDGQLFRVG DQTYIVPLVS VIESLQVDGS KLSRVTGRGE VYHWREGYVP
IVRLHELFDT EPVRRELAGG LMVIVEDEDT YLGVFVDDLL DQQQVVIKSL EANYLQVPGI
AGATILGDGT VALILDIAGL IEMSRGGRRQ PYIPTPEDSD EAA
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