Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2152 |
Symbol | |
ID | 4709707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2360460 |
End bp | 2362130 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639856627 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_001003718 |
Protein GI | 121998931 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0875259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCAGT ACGTCTTTAC CATGAACCGG GTATCCAAGG TGGTACCCCC CAAGCGACAG ATCCTCAAAG ACATCTCGCT GTCCTTTTTC CCGGGCGCCA AGATCGGCGT CCTCGGCCTC AACGGGGCGG GCAAGTCCAG CCTGCTGCGC ATCATGGCCG GCGAGGACCA GGAGATCGAC GGCGAGGCGC GGCCGCAGCC GGGCATCAAG ATCGGTTACC TGCCCCAGGA GCCGCGGCTC GACGACGACA AGGACGTGCG CGGCAACGTC GAGGAAGGCG TGGCCGAGAC CAAGGCGCTG GTGGACCGCT TCAATGAGGT CTCGGCGCAG TTCGCCGACC CGGAGGCCGA CTTCGACGCC CTGATCGCCG AGCAATCCAA GCTTCAGGAT CAGATCGAGG CGGCCGGCGC CTGGGATCTG GACCGCAAGC TGGAGCAGGC CGCCGACGCC CTGCGCCTGC CCCCGTGGGA CGCCGCCGTA GCCAACCTCT CCGGTGGCGA GCGGCGCCGC GTGGCGCTGT GCAAGCTCCT GCTCTCGGCG CCGGACATGC TCCTGCTCGA TGAGCCCACC AACCACCTCG ACGCCGAGAG CGTGGCGTGG CTGGAGCGTT TCCTCCACGA GTTCCCAGGC ACCGTGGTGG CCGTGACCCA CGACCGCTAC TTCCTGGACA ACGTGGCCGG GTGGATCCTC GAGCTCGACC GCGGCGAGGG CATCCCCTTC CAGGGCAACT ACTCTGCGTG GCTGGAGTAC AAGGAGAAGC GACTGCAGCA GGAGGCCCGC GAGGAGCAGG CCCAGCGCAA GGCGATCCAG CAGGAGCGTG AGTGGGTCCA GCAGAACCCC AAGGGCCGGC AGGCCAAGAA CAAGGCCCGC ATCAAGCAGT TCGAGGAGCT GCAGTCCCAG GAGTTCCAGA AGCGCAACGA GACGCAGCAG CTCTACATCC CGCCGGGGCC GCGCCTGGGC GACAAGGTAG TGATTGCCGA CGGAGTGCAA AAAGCCTTTC GCGGCGAGCT GCTCTATGAG GACCTCAGCT TCATCATCCC GCCCGGCGCC ATCGTCGGCC TGGTCGGTCC CAACGGCGCC GGTAAGACCA CGCTGTTCCG CATGATCACC GGCGAGGAGC AGCCCGACGC CGGCACCATC GACGTCGGCG AGACTGTGGA ACTGGCCTAC GTGGACCAGA GCCGCGATGC CCTCAACCCG GAGAACACCG TCTGGCAGGA GATCTCCGGC GGCCACGACT ACATCCGGGT GGGCAACTAC GAGACCCCGT CCCGGGCCTA CGTGGGCAAA TTCAACTTCC GGGGCTCCGA GCAGCAGAAG CGCGTCGGCG ACCTCTCCGG CGGCGAGCGC AACCGCGTTC ACCTGGCCAA GCTCCTGCAG AGCGGCGGCA ACACCCTGCT GCTCGACGAG CCGACCAACG ACCTGGACGT GGAAACCCTG CGTGCCCTCG AAGACGCCCT GCTCACCTTC CCCGGGTGTG CCCTGGTCAT CTCCCACGAT CGCTGGTTCC TGGACCGGAT CGCCACCCAC ATCCTGGCCT TCGAGGGCGA GAGCCGAACT GCCTTTATCG AGGGTAACTA CCAGGATTAC GAGGCCGACC GGAAGAAGCG CCTCGGCGAC GAGGCGGCCC AGCCCCACCG CATCAAGTAC AAGCGGCTCG GCACGGGCTG A
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Protein sequence | MAQYVFTMNR VSKVVPPKRQ ILKDISLSFF PGAKIGVLGL NGAGKSSLLR IMAGEDQEID GEARPQPGIK IGYLPQEPRL DDDKDVRGNV EEGVAETKAL VDRFNEVSAQ FADPEADFDA LIAEQSKLQD QIEAAGAWDL DRKLEQAADA LRLPPWDAAV ANLSGGERRR VALCKLLLSA PDMLLLDEPT NHLDAESVAW LERFLHEFPG TVVAVTHDRY FLDNVAGWIL ELDRGEGIPF QGNYSAWLEY KEKRLQQEAR EEQAQRKAIQ QEREWVQQNP KGRQAKNKAR IKQFEELQSQ EFQKRNETQQ LYIPPGPRLG DKVVIADGVQ KAFRGELLYE DLSFIIPPGA IVGLVGPNGA GKTTLFRMIT GEEQPDAGTI DVGETVELAY VDQSRDALNP ENTVWQEISG GHDYIRVGNY ETPSRAYVGK FNFRGSEQQK RVGDLSGGER NRVHLAKLLQ SGGNTLLLDE PTNDLDVETL RALEDALLTF PGCALVISHD RWFLDRIATH ILAFEGESRT AFIEGNYQDY EADRKKRLGD EAAQPHRIKY KRLGTG
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