| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2149 |
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| Symbol | |
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| ID | 4709725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2350265 |
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| End bp | 2352307 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639856624 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001003715 |
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| Protein GI | 121998928 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCCG CCCCGATACC CGATAACGAG CACATCCGGC TGGCCGCGCT GTACAGCTAC
CGGATCCTCG ACACCGAGGC CGAGGCGGCC TTCGACCGCT GCGTACGGAC CCTCTGCCAG
ATCTATCAGG TGCCCATCGC CACGGTCACC TTCGTCGACC GCGACCGGCA GTGGTTCAAG
TCGGCCCAGG GCCTGGAGGA CTGCGAGACA CCGCGATCCA CCTCCTTCTG CGGCCATGTG
GTGGCCGACG GCAACCCGCT GGTGGTGGAG GACACGCATC AAGACCCACG CTTCCACGAC
AATCCGCTGG TCACCAGCCC GCCGCATATC CGCTTCTACG CCGGTGTACC GCTGATCACC
CCGGCCGGCC AGCCTATCGG GGTCCTGTGC ATCCAGGACC GGCAGCCCCG CCGTTTCAGC
GACGAGGACC TGATCCCGCT GCAGGACCTG GCGGTGCTGC TGATCAGCGA ACTCGAACTG
CGTCACCGCG AGAACGTGCA GCGACTGCGC CGACAACTCG AGCACCGGCA GCGAGAGCTG
GAGGCGATCT TCCAGGCCGC CACCTCGGTC AGCCTGATCA AGACCGATCT CGAGGGGATC
ATCCAGGAGA CCAGCACCGG CACCGAGGCC CTGTTTGGCT ATGCACGCCA CGAGCTGATC
GGCCGCCCGG TCGCGCTGGT TCACCGCCCG GAGGATCACA CCCAGCCGGG GACCATCATC
GAACGGCTGC GCAATGATCG CACACCGGTC CGTCGTGAAA TGCCCCTCAT GCGCAGCGAC
GGCAGCACCT TCCCCGCGCT CTTTTCGGTC CACCCGATCA CCGACGCCCA CGACGAGCTG
ATCGCCACGC TGAGTGTGAC CTTCGATATC AGCGATCAGA AGCGGGTCGA GCAGGAGCTC
GAGCAGGCCG TTCGGGCCAA GAGCGACTTC CTGAACGCGG TCAGCCACGA TCTGCGCACG
CCACTGAACG CGCTGATGGG GTTCTCCCAG TTGCTTGCCG AGACGGACCT CACGCCGGAA
GAACGACAAC GCTACGCGGA GCACTGCCGG CGCGGCGGCG AGCGGCTGCA CGGCCTGATC
GACTCACTCC TGGAGCTCAG CCGCCTACAG AGCGGCGGGA TGCGGGCACA CACCGAGCCG
CTAGCGTTGC CGGCACTGAT TGAAGAGCAA TGCGCCCTGT TCCGACCCGC CGCTGAGAGG
AAGGGCATCG AGCTGGCTTG CCAGATCAGT GCCGACCTCC CGCGCTGGAT TCAGGGGGAC
CGGACCCGAC TTGAACAGGC GCTCTCCAAC CTGATCGATA ATGCCATCAA GTACACAGAG
GCGGGTCACG TCCGGATCAC CGCCAGCGCC GAGGGCGAAC AAATTACCTT GGCGGTGGAG
GACACCGGGC CCGGCATCCC CGCCGAAAAC CGGGACCGGA TCTTCGCGGC CTTCGATCGA
GGGAACTACC AGGGCGAGCA ACAGGGCCAC GGCCTCGGCC TGGCGATCGC CCGGGAGATC
GCCCAGCTGA TGGGCGGCAA TCTCCACTTG GACAGTGAGC AAGGCCGGGG GACCACCTTC
ACCCTGACCG CACGGCTCCA GACACTCTGT GAAGAGACCA CCCCCCATGC GCAACGCCCC
TGCCAGCCTG CAAAGGGGCC ACCGCAGCCC GGCCTGCGCA TCCTGGTCGC GGAGGATGAC
CCCACCAACG CCATACTGGC TCGCACCCTG CTGGAGCGCC TGGATGCGCA GGTGACCGTC
GTGGAAGACG GGGTGACCGC CCTGCACACC TGGCGTGATG GCACCTTCGA CCTCCTCTTG
CTGGATCTGC AGATGCCGGG CCTGGATGGC CTCCAGTTGG CCCGAGCCAT CCGCCACGAA
GAGAACCAAG AGCACCGAGC CCCGGCCCGT ATCGCCCTAT TCACCGCGCA CGCCCGCAGC
GAGGTCGAGC AGCGGGGGTT TGAGGCTGGC TGCGATGAGT TCCTCACCAA GCCGGCCCGG
AAAGGCGATC TTGAGGCCCT CCTGGCACGG GCCGGTTCGC CGGATCCTCA GCCGCCCCGA
TAG
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| Protein sequence | MKSAPIPDNE HIRLAALYSY RILDTEAEAA FDRCVRTLCQ IYQVPIATVT FVDRDRQWFK
SAQGLEDCET PRSTSFCGHV VADGNPLVVE DTHQDPRFHD NPLVTSPPHI RFYAGVPLIT
PAGQPIGVLC IQDRQPRRFS DEDLIPLQDL AVLLISELEL RHRENVQRLR RQLEHRQREL
EAIFQAATSV SLIKTDLEGI IQETSTGTEA LFGYARHELI GRPVALVHRP EDHTQPGTII
ERLRNDRTPV RREMPLMRSD GSTFPALFSV HPITDAHDEL IATLSVTFDI SDQKRVEQEL
EQAVRAKSDF LNAVSHDLRT PLNALMGFSQ LLAETDLTPE ERQRYAEHCR RGGERLHGLI
DSLLELSRLQ SGGMRAHTEP LALPALIEEQ CALFRPAAER KGIELACQIS ADLPRWIQGD
RTRLEQALSN LIDNAIKYTE AGHVRITASA EGEQITLAVE DTGPGIPAEN RDRIFAAFDR
GNYQGEQQGH GLGLAIAREI AQLMGGNLHL DSEQGRGTTF TLTARLQTLC EETTPHAQRP
CQPAKGPPQP GLRILVAEDD PTNAILARTL LERLDAQVTV VEDGVTALHT WRDGTFDLLL
LDLQMPGLDG LQLARAIRHE ENQEHRAPAR IALFTAHARS EVEQRGFEAG CDEFLTKPAR
KGDLEALLAR AGSPDPQPPR
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