Gene Hhal_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2143 
Symbol 
ID4709733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2343767 
End bp2344771 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content75% 
IMG OID639856617 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_001003709 
Protein GI121998922 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGC GGCCGGAGAC TCTCCACCGC CAGCTGGAGC GCGGGCCGCT GCCCCGAGTC 
TGTTTCATCG CCGGCGAGGA GCCGCTGCTC CAGCGTGAGG CCACCGACGC CGTGCGTCGG
GCGGCGCGGG AGGCCGGGCA CTCCGAGCGC GAGGTGCTCG ATGTCGATGC CGGCTTCGAC
TGGGGGTGGC TCACCGAGGC CGCCAGCAGT CTGTCGCTAT TCGGTGATCG TCGCCTGCTG
GAGGTGCGCA TGCCCGGCGG CAAGCCCGGG CGCGACGGGG CCGAGGCCCT CAAGGCCTAC
TGCCAGGACC CCCCGGAGGA TACCGTCCTG CTGTTGACCA GCGGGCGCCT GGAGCGTTCC
GCCCGTGAGT CGGCCTGGGC GCGGGCGCTG GCCGAGGCCG GGATCTTCGT CTACTGCTGG
CCGGTGCCGG GGCGCGACAT GCCGCGCTGG GTAGCCGAGC GGCTACGCCG CGCCGGTCTG
CAGGCGGATC CGGAGGCAGC GGCGCTGATC GCCGAGCGCT CCGAGGGGAA TCTGCTGGCC
GCCGATCAGG CGGTGGAGAA GCTACGCCTG CTGGTTGGCA GCGGCACCGC CGTGGATGTC
GAGACGGCCG CCGGGGCGCT GGCCGACAGC GCCCGGTACA CCGTGGACGA TCTGGCCGAC
GCTGCCCTGG ACGCGGAGTG GACGCGGGCG CTGCGTGTCC TCGCTACGCT CCGGGAGGAG
GGCGTGCAGC CGCCGCTGAT CCTCTGGGCC CTGGCCCGGG ATATCCGGGT GGCGGCGCGG
CTGGCGGCCG GCGCCGATGA GGGGGTGCTG CAGCGCGAGC GGATCTGGAA GCGGCGGGTC
GGGCGGCTGC GCCAAGCGGC CCGCCGGCAT CCGGCGGGGG CCTGGCGGCA GCTGCTGCAG
CGCTGCCACC GTGTGGATCG GGCCATCAAG GGCCTGCCGC CCGGTGACCC CTGGGAGCAG
CTGCGGGCCC TGGTCTCTCG TCTGGCCCGC GCCATGGCAA AATAG
 
Protein sequence
MAERPETLHR QLERGPLPRV CFIAGEEPLL QREATDAVRR AAREAGHSER EVLDVDAGFD 
WGWLTEAASS LSLFGDRRLL EVRMPGGKPG RDGAEALKAY CQDPPEDTVL LLTSGRLERS
ARESAWARAL AEAGIFVYCW PVPGRDMPRW VAERLRRAGL QADPEAAALI AERSEGNLLA
ADQAVEKLRL LVGSGTAVDV ETAAGALADS ARYTVDDLAD AALDAEWTRA LRVLATLREE
GVQPPLILWA LARDIRVAAR LAAGADEGVL QRERIWKRRV GRLRQAARRH PAGAWRQLLQ
RCHRVDRAIK GLPPGDPWEQ LRALVSRLAR AMAK