Gene Hhal_2128 details

Gene Information

• Locus tag: Hhal_2128
• ID: 4711023
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 2329208
• End bp: 2329678
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639856602
• Product: putative PTS IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_001003694
• Protein GI: 121998907
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.15934
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACATCG AGCAACTCAT CACGCCGGAA CGTGTTCGCT GCGAGAGCGG CATCGAGGAC 
AAGGAGCAGG TACTCCTGCG CATAGGCGAA CTGATCGGGG CCAGCGGCGA CGGCCTCGAC 
GCCCGAGAAA TCAGCAACCG ACTGCTGGCC CGTGAGCGGC TGGGCAGCAC GGGCCTGGGG 
CACGGCGTAG CCGTACCCCA CGCCCGCATC GACGGGATTG ACCGCGCCAT CGGCGCCCTG 
ATCCAGCTGG ATCGGGGCAT CGAGTTCAAC GCCTTCGACA AGGCACCCGT GGACCTGCTG 
TTCGCCCTGG TCGTACCCGA ACACTTCACC GACGAGCACC TGCAGATCCT GGCCAGCCTC 
GCCGAGATGT TCAGCGACAG CAGCCTGTGC GAACGGCTGC GCCGCTCCTC GGACGGTGAG 
GAACTGCAGG TGGCCCTGCG GGAATGGCAG TCACAAGCCG ACCCGTCGTG A 

 

Protein sequence

MDIEQLITPE RVRCESGIED KEQVLLRIGE LIGASGDGLD AREISNRLLA RERLGSTGLG 
HGVAVPHARI DGIDRAIGAL IQLDRGIEFN AFDKAPVDLL FALVVPEHFT DEHLQILASL 
AEMFSDSSLC ERLRRSSDGE ELQVALREWQ SQADPS