| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2125 |
|---|
| Symbol | |
|---|
| ID | 4709829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 2326564 |
|---|
| End bp | 2327289 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639856599 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001003691 |
|---|
| Protein GI | 121998904 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCACGC TGCGTGCGGA AGGGCTGACC AAACGCTACC GCGGTCGCAC TGTGGTCAAC
GGCGCCGGGC TCGAAGTGGC CAACGGCGAG ATCGTCGGCC TGCTCGGGCC CAACGGCGCC
GGCAAGACCA CCTGCTTCTA CATGGTCGTC GGACTGGTCC AGGCCGACGA GGGGCGGATC
ACCCTGGAGG GCGACGACCT CACCCGGCTG CCCATCCACG CCCGGGCCCG CCTCGGCATC
GGATACCTCC CGCAGGAACC CTCGGTCTTT CGTAAACTGA GCGTGGCGGA TAACGTACGG
GCCATCCTGC AGCTACGCGG CGACCTCGGC GGCGCCGAGC GGGAACAGGA GCTGGATCGC
CTGCTCGAGG AGTTCGGGGT GACCCACGTC CGCGACTCCC CGGGCATCGC CCTGTCCGGC
GGCGAACGCC GGCGCGTGGA GATCGCCCGC GCCCTGGCGG CAGCCCCCCG GTTCATACTG
CTCGACGAGC CGTTTGCCGG GGTCGACCCG ATCTCGGTGG GCGAGATCCA GCGCATCGTC
CGCCAGCTGG CGCAGCGCGG TATTGGCGTA CTGATCACCG ATCACAACGT GCGCGAGACA
CTGGGGATCG TGCAGCGCGC GTACATCCTC AGCGACGGCG AGGTTCTGGC CGCTGGCGAC
GCCGAAAGCG TGCTCGCCAA CCCGCGGGTC CGCGAGGTCT ATCTGGGTGA GGACTTCCGC
CTGTGA
|
|---|
| Protein sequence | MVTLRAEGLT KRYRGRTVVN GAGLEVANGE IVGLLGPNGA GKTTCFYMVV GLVQADEGRI
TLEGDDLTRL PIHARARLGI GYLPQEPSVF RKLSVADNVR AILQLRGDLG GAEREQELDR
LLEEFGVTHV RDSPGIALSG GERRRVEIAR ALAAAPRFIL LDEPFAGVDP ISVGEIQRIV
RQLAQRGIGV LITDHNVRET LGIVQRAYIL SDGEVLAAGD AESVLANPRV REVYLGEDFR
L
|
|---|
| |