Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2124 |
Symbol | |
ID | 4709832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2326033 |
End bp | 2326560 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639856598 |
Product | OstA family protein |
Protein accession | YP_001003690 |
Protein GI | 121998903 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTGCA TTGAGACCAC GGGCCGCACC CGGGTGCGGC TTCTTGGCGC CGCGCTGCTC GCCATCGCCG CCCTACCGGC GGCGGCGATG GAGCAGCGCG AGGACGCGCC GGTGGAACTC GAGGCCGACA GTGTGGACGT CGACGCCGTT GCCGGGGTCA GCGTCTACGA GGGCGATGCC GTGCTCACCC GGGGCGAGAT GCGCATCACC GGCGACCGCA TGGAGGTCTA TACCGACGAG GACGGCGACC TCAGCCACGT CTACGTTGAC GGAACGCCCG CCACCTACCG CGACCACCCG GAGAACCAGC CCCGCCCGGT CCACGCCGAG GCGAAGCGGA TGGAGTACTA CACCCGCGGG CCCGAACGCG CCCATTTCCA GGGCGATGCG CGCCTCTGGC AGGGAGACGA CCAGGTCACC GCCGAGACCA TCGATGTCGA CCTGGAGGGA CAGATCATGA AGGCCCGTGG CGCTGAAGGG CAGCGGGCGC GGACCATCCT GTACCCGACC CGGCGCGAGG AGGACTGA
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Protein sequence | MGCIETTGRT RVRLLGAALL AIAALPAAAM EQREDAPVEL EADSVDVDAV AGVSVYEGDA VLTRGEMRIT GDRMEVYTDE DGDLSHVYVD GTPATYRDHP ENQPRPVHAE AKRMEYYTRG PERAHFQGDA RLWQGDDQVT AETIDVDLEG QIMKARGAEG QRARTILYPT RREED
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