Gene Hhal_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2124 
Symbol 
ID4709832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2326033 
End bp2326560 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content70% 
IMG OID639856598 
ProductOstA family protein 
Protein accessionYP_001003690 
Protein GI121998903 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTGCA TTGAGACCAC GGGCCGCACC CGGGTGCGGC TTCTTGGCGC CGCGCTGCTC 
GCCATCGCCG CCCTACCGGC GGCGGCGATG GAGCAGCGCG AGGACGCGCC GGTGGAACTC
GAGGCCGACA GTGTGGACGT CGACGCCGTT GCCGGGGTCA GCGTCTACGA GGGCGATGCC
GTGCTCACCC GGGGCGAGAT GCGCATCACC GGCGACCGCA TGGAGGTCTA TACCGACGAG
GACGGCGACC TCAGCCACGT CTACGTTGAC GGAACGCCCG CCACCTACCG CGACCACCCG
GAGAACCAGC CCCGCCCGGT CCACGCCGAG GCGAAGCGGA TGGAGTACTA CACCCGCGGG
CCCGAACGCG CCCATTTCCA GGGCGATGCG CGCCTCTGGC AGGGAGACGA CCAGGTCACC
GCCGAGACCA TCGATGTCGA CCTGGAGGGA CAGATCATGA AGGCCCGTGG CGCTGAAGGG
CAGCGGGCGC GGACCATCCT GTACCCGACC CGGCGCGAGG AGGACTGA
 
Protein sequence
MGCIETTGRT RVRLLGAALL AIAALPAAAM EQREDAPVEL EADSVDVDAV AGVSVYEGDA 
VLTRGEMRIT GDRMEVYTDE DGDLSHVYVD GTPATYRDHP ENQPRPVHAE AKRMEYYTRG
PERAHFQGDA RLWQGDDQVT AETIDVDLEG QIMKARGAEG QRARTILYPT RREED