Gene Hhal_2122 details

Gene Information

• Locus tag: Hhal_2122
• ID: 4709752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 2324916
• End bp: 2325479
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 639856596
• Product: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
• Protein accession: YP_001003688
• Protein GI: 121998901
• COG category: [R] General function prediction only
• COG ID: [COG1778] Low specificity phosphatase (HAD superfamily)
• TIGRFAM ID: [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA; [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACCA CCGTCCCCCG CCCCTACTGC GAGCCGCCTG CCCCGGAGGT CCTGCGCCGC 
GCCGAATCGG TGCGCCTGGC CCTGTTCGAC GTCGACGGCG TCCTCACCGA CGGGACCGTC 
TTCGTGGGCG GCAGCGGTGA CCCGCTGCAG GCGTTCCACA TCCACGACGG CAAGGGGCTG 
CGGATGCTCC AGGACGCCGA CATCGAGGTG GGCTGGATCA CTGCCCGGGG CGGCCACGCG 
GTCATGCGCC GGGCCGAGGA GCTGGGTGTC CGCCATGTGC TGCGCGGCCG CTCAGACAAG 
GGTCAGGCCC TCGTCGAGGT GGCCGAGCGC CTCGGCCTCG CCCTGGAGGC GTGCGCCTAC 
ACCGGCGACG ACCTCATCGA CCTGCCGGCC GTCCGCCACG CCGGATTCGG CGTCGCGGTA 
GCGGACGGCC ACCCCCACCT GCACGCCCAC GCCGACTGGG TCACCGTGCG CCCCGGGGGG 
CGGGGCGCCG TCCGCGAGGT GGCCGAACTG ATCCTCCACG CCCAGGGGCA GCTCGAACCG 
ATGTTGCGCC GGGCAGAAGG CTGA 

 

Protein sequence

MSTTVPRPYC EPPAPEVLRR AESVRLALFD VDGVLTDGTV FVGGSGDPLQ AFHIHDGKGL 
RMLQDADIEV GWITARGGHA VMRRAEELGV RHVLRGRSDK GQALVEVAER LGLALEACAY 
TGDDLIDLPA VRHAGFGVAV ADGHPHLHAH ADWVTVRPGG RGAVREVAEL ILHAQGQLEP 
MLRRAEG