Gene Hhal_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2116 
Symbol 
ID4709758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2320762 
End bp2321076 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content72% 
IMG OID639856590 
Productanti-sigma-factor antagonist 
Protein accessionYP_001003682 
Protein GI121998895 
COG category[R] General function prediction only 
COG ID[COG3113] Predicted NTP binding protein (contains STAS domain) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCG CGGCCCTCGA GAACGGGGTC GACGGGCGCT GGCGAGTCAC CGGGCGGCTG 
GAGCTCGACA CCGTGGGTGC CTTGTGGCCG CAGGGCACGG CGCTGTTCAC CGCCGAAGGC
GGGGTCTGCG AAATCGACCT GGCCGGTGTC GAGCGGACCG ACAGCGCCGG TGTGGCCCTC
CTGATCGATT GGACGCGGCA GGCCCGGGCC CACGGCGGGC GGCTGTGCCT CTGCCACGTC
CCGCAGCAGT TGCTGGCCAT CGTGCATGCC AGTGGTGCGG AGGGGGTGCT TGAAATCGCC
GACGAGCCGG CCTGA
 
Protein sequence
MTRAALENGV DGRWRVTGRL ELDTVGALWP QGTALFTAEG GVCEIDLAGV ERTDSAGVAL 
LIDWTRQARA HGGRLCLCHV PQQLLAIVHA SGAEGVLEIA DEPA