| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2110 |
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| Symbol | |
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| ID | 4710050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2314790 |
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| End bp | 2316043 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639856584 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_001003676 |
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| Protein GI | 121998889 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0560997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCTAG CAGGACGATC CGGTTGGCGG CCATTGGGCC TGGAGGGCAC CGAGTGGATT
CGGTTTCTCC TCGGATACAC CGGGCTGGGC GTGGTGTTGG CCCTGGTCAT CGTCTGGATC
AACCCTGACC TGCTGGGCCC CCTGACGCCC CGGGTCGAGA TCACCGAGAG TGAAGATTGC
CAGACCGTCG CCCCGGGGCG ACAAAACGAC GCAGCCGATG CGCCGCCTCG ACGGGAACCG
GTCTCCTACG CCGACGCGGT GGAACGGGCC GCGCCGGCGG TGGTGAACAT CTTCACGGTC
AAGCAGGTCA CCGAACAGCT CACCCCGCCC GGATTCGACG ATCCCCTATT CCGCCGCTTC
TTCGGCGACC CTCCGACCCG CGAGCGCCAA CGCACCGAGA CCAGCCTCGG CTCGGGGGTC
ATCGTCGCCG AGGAAGGCTA TGTGGTCACC AACCACCACG TCATCGACGA CGCCGACCAG
ATCCAGGTAC TGCTGGCCGA CGGTCGCCAG AGGGCGGCCA CGGTGGTGGG GCGCGACCCG
GAGACGGACC TGGCAGTGCT GCGCATCGAG GCCGAACGGC TGCCAGTGAT CACCTTCGCC
CGGGACGAGC GGGTGCGGGT GGGCGACGTG GTGCTGGCCA TCGGCAACCC GTTCGGGGTC
GGACAGACGG TCACCCAGGG GATCATCAGC GCCACCGGGC GCGACCAGCT GGGGCTGTCG
ACCTTCGAGA ACTTCCTGCA GACCGATGCC GCCATCAACC CGGGCAATTC CGGTGGCGCC
CTGATCGACG CCGAGGGGCG GCTGGTGGGG ATCAATACCG CCATCTTCAG CGGCACCGGC
GGCTCACAGG GGATCGGCTT CGCCATCCCG GCGGGCATTG CCCAGGCGGT GATGTCCGAC
CTGATCCAGT ACGGACGCGT GGTGCGCGGC TGGCTGGGGG TACAGGCACA GCGGCTGACG
CCGGCCCTCG CCGAGTCCTT CGGCCACCCC CCGGATACCG AGGGCGTAGC GGTCACCCAC
ATCCTGCCCC GCGGACCGGC GGACCAGGCC GGCCTGGAGG CCGGCGACAT CATCGTCGAG
CTGGGCGGTC AGCGCATCCG CGACGTCCAG GATCTGCTGC AGGTGGCCAG CGCGGCGGCA
CCGGGCACCG AGATGGAGAT CTCCGGCTAC CGCGATCAGG AGCCTTTCTC AACCTCCGTC
ACCCTCGGTG AGCGGCCGGA CATGCAGCAG CCCAGCCACC CCGGGCGGCG CTAA
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| Protein sequence | MRLAGRSGWR PLGLEGTEWI RFLLGYTGLG VVLALVIVWI NPDLLGPLTP RVEITESEDC
QTVAPGRQND AADAPPRREP VSYADAVERA APAVVNIFTV KQVTEQLTPP GFDDPLFRRF
FGDPPTRERQ RTETSLGSGV IVAEEGYVVT NHHVIDDADQ IQVLLADGRQ RAATVVGRDP
ETDLAVLRIE AERLPVITFA RDERVRVGDV VLAIGNPFGV GQTVTQGIIS ATGRDQLGLS
TFENFLQTDA AINPGNSGGA LIDAEGRLVG INTAIFSGTG GSQGIGFAIP AGIAQAVMSD
LIQYGRVVRG WLGVQAQRLT PALAESFGHP PDTEGVAVTH ILPRGPADQA GLEAGDIIVE
LGGQRIRDVQ DLLQVASAAA PGTEMEISGY RDQEPFSTSV TLGERPDMQQ PSHPGRR
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