Gene Hhal_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2105 
Symbol 
ID4711106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2310651 
End bp2311079 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID639856579 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_001003671 
Protein GI121998884 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.054144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCGA GTCGTCCCTA CCTCATCCGG GCGATCTACG AGTGGATCGC CGATAACGGT 
TACACCCCCT ATCTGCTGGT GGATGCCAGT CGGGAGGATG TCGACGCCCC GCTGGAATAC
GCCGAGGACG GCCGACTGGT GCTGAATGTG GCACCGCGGG CGGTCCAGGG GCTGAACATG
GGCAACGACG AGATCGTCTT CCGTGCCCGT TTCGGTGGTG TGCCGCGCGG TGTTCAGGTG
CCGGTGAACG CGGTCATGGC CATCTATGCC CGGGAGAACG GGCAGGGCAT GCTCTTCGGT
GAGGGCGATG ACGCCGAGTC GGAGGAGTAC GAGGCCCTGG ACGCGGGGCA GGACAGTGAC
GATGACCACG ACGGGCCGCC GGACGGCCCC AGCGGGGGCA AGCGGCCCAA TCTGCGCGTG
GTCAAATAG
 
Protein sequence
MTPSRPYLIR AIYEWIADNG YTPYLLVDAS REDVDAPLEY AEDGRLVLNV APRAVQGLNM 
GNDEIVFRAR FGGVPRGVQV PVNAVMAIYA RENGQGMLFG EGDDAESEEY EALDAGQDSD
DDHDGPPDGP SGGKRPNLRV VK