Gene Hhal_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2103 
Symbol 
ID4710057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2309638 
End bp2310003 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content71% 
IMG OID639856577 
Producthypothetical protein 
Protein accessionYP_001003669 
Protein GI121998882 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.374615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCCC CACAGACGAC GCGGAATGAC CCACGGCAGC GCGGCCAAGA GGCCGAGGAG 
CGCGCGCGCG CCTACCTCGA AGGGCAGGGG CTGCAGACCC TGGCGCGGAA CTTCCGGACC
CGCCGGGGCG AGATCGATCT GATCATGGCC GACGGCGGCG TCACGGTGTT CGTCGAGGTC
CGCCGCCGCA GTCACCCCGG GTACGGCGGC GCAACGGCCT CCGTGGATCG GCGCAAGCGC
CAGCGCCTGA GCCGTGCCGC CAGCGCCTGG CTGGCCCGGC ACCCCGGGTG GGCCCGTTTC
GATGTAGTCG CCACGGACGG CCACGAGGTG CACTGGGTGC GCGATGCATT TCGGGAAGAA
AGCTAA
 
Protein sequence
MMAPQTTRND PRQRGQEAEE RARAYLEGQG LQTLARNFRT RRGEIDLIMA DGGVTVFVEV 
RRRSHPGYGG ATASVDRRKR QRLSRAASAW LARHPGWARF DVVATDGHEV HWVRDAFREE
S