Gene Hhal_2102 details

Gene Information

• Locus tag: Hhal_2102
• ID: 4710060
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 2307771
• End bp: 2309666
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639856576
• Product: LppC family lipoprotein
• Protein accession: YP_001003668
• Protein GI: 121998881
• COG category: [R] General function prediction only
• COG ID: [COG3107] Putative lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTGCC CCACGCGCGT TCTTCAGTTC CTGATCGTGG CCGCGCTGCT GGCGGCACTC 
TACAGCTGTG CCCCGACGCC GGTCACGCCC GCCGACACAC CGGAGCAGAG CGAGGCGCAG 
GCAGACGACG CCCGCGCCGC GGGTGACGCT GCCCGTGCTG CGGAACTCTA TGATGCGGCA 
GCGGAGGGCT ACGAGGAAGC CGCGGACCGC AATCGAGTCA GCATCGCCGC TGCCCGCAGC 
TGGCTCGAGG CTGAAGAGCG GGACGCCGCG ACCACGGCGT TGGCCCGGGT CGACCCCGAA 
CACCTCGGCG AATCGGACCG GGACCGCTTC ACCCTCGCCC GAGCCCAACT GGCCCTGCAG 
CGCGAGCGCC CAGATCTCGC CGCGTCCCTC CTCGACAACC TGGCGGAACC GCCGGCCGGC 
GAGGAGGCCG ACTACCACCG CCTGCGCGCC GCAGCGGCGG CGGTCATGGA CGACCACCTG 
AAGGTCGCTG AACAGCGCGT GGCCCTGGAG CAGCACCTGG AGACCCCGTC ACAGCGAGAG 
GAAAACCGCA ACCTCATCTG GCAGGCCCTG GGCCGCACCC CCGCCCCGCA GCTGCAGGAG 
ATCGACCCGG ACGACGACAC CTACGGCGGC TGGGTGCGGC TGGCACAGAT CGCCCGCAGC 
CACCGCCTCG ACCCGGAGCG ACTCGAGGAG GCGGTATCCG ACTGGGAGGC GGCCTTCCCG 
GACCACCCAG CCCGCGACCA CCAGGCCACC GAGCTGATCA CCCGGTTCCA CGAGCGGATC 
CGCCGCCCCG AGCGCGTTGC CCTGCTGCTG CCGCTGAGTG GCGATTTCCG CGAAGCCGGC 
CGGGCGGTGC GCGACGGGAT CCTCTCCGCC TATTTCAGCG ACAACAACCA GCGCCCGGAG 
ATCACCGTCC ACGACACCGG CGGCGATCCG GAGCGTGCGC TGGAGGCCCT GGCCGAGGCC 
CGCGAGGCCG ACAGCGACGC GGTGATCGGC CCCCTCACCC GCGGCGCCGT CCGGGCGATC 
GCCGACGCGG ACGAGAGCCC GCCGACCCTG GCCCTGAACA CCCTCGATGA CAATGGCACC 
GCGGAGCACC TCTATCAGTT CGCGCTCACC CCGGAAACCG ACGCGCGACA GGCGGCGCTG 
CACGCGCAAC GGCGCGGCTG GAGCAGTGTG GTCATCCTCG CCCCGCGAAC CGACTGGGGG 
GAACGAGTCC AGCGGGCGTT CCAGGAGGCC TTTGAAGAGA CCGACGGCAC CGTGCTTCAG 
AGCGAAGCCT ACGACGCGGG TGACGCTGAC TTCTCCGGGC CGATCCGGGA AGTGCTCAAC 
CTGCGCGTCA GCAGCCTGCG CCACCAGGAA CTCACCCGAA CCCTGGGACA GTCGCTGGAG 
TATCAACCGC GCCGCCGCCA GGACGTGGAC GCCATCTTCC TCGCCGCCTC GCCCGAGGCG 
GGGCGGCTGC TGCGCCCACA GCTCGAGTAC CACCACGCCC AGGACGTGCC GGTGCTCTCC 
ACCGCTCACA TCTACGGCGG CGCCCCTCGC CCCGAGGAGG ACCGCGACCT CGACGGCCTG 
CACTTCGTCG ACGGCCCCTG GCTGGTCGGC CGGTCGCTGG GCATCCCGGA GGCGCTGGAA 
CGCGAACGGC TCGCCGAGCT ACTCGGTGAC GTCCTGCGCC GCGAGGCCCG TCTAGTGGCC 
CTGGGTATCG ACGCCTACCG CATCTTCCCG TACCTCGAGG TCCTCAGCGA ACACCCAGAG 
GAGCGCTTGG ACGGGCTGAC TGGCAAACTC CACCTGAACA GCGAGCGCGT GGTCGAGCGC 
GAGCTGGTCG CCGCGCGGTT TGTCCGCGGC CGACCGGTAT TCGAACAACC GGCCACGGAG 
GGCGGCGATG ATGGCCCCAC AGACGACGCG GAATGA 

 

Protein sequence

MTCPTRVLQF LIVAALLAAL YSCAPTPVTP ADTPEQSEAQ ADDARAAGDA ARAAELYDAA 
AEGYEEAADR NRVSIAAARS WLEAEERDAA TTALARVDPE HLGESDRDRF TLARAQLALQ 
RERPDLAASL LDNLAEPPAG EEADYHRLRA AAAAVMDDHL KVAEQRVALE QHLETPSQRE 
ENRNLIWQAL GRTPAPQLQE IDPDDDTYGG WVRLAQIARS HRLDPERLEE AVSDWEAAFP 
DHPARDHQAT ELITRFHERI RRPERVALLL PLSGDFREAG RAVRDGILSA YFSDNNQRPE 
ITVHDTGGDP ERALEALAEA READSDAVIG PLTRGAVRAI ADADESPPTL ALNTLDDNGT 
AEHLYQFALT PETDARQAAL HAQRRGWSSV VILAPRTDWG ERVQRAFQEA FEETDGTVLQ 
SEAYDAGDAD FSGPIREVLN LRVSSLRHQE LTRTLGQSLE YQPRRRQDVD AIFLAASPEA 
GRLLRPQLEY HHAQDVPVLS TAHIYGGAPR PEEDRDLDGL HFVDGPWLVG RSLGIPEALE 
RERLAELLGD VLRREARLVA LGIDAYRIFP YLEVLSEHPE ERLDGLTGKL HLNSERVVER 
ELVAARFVRG RPVFEQPATE GGDDGPTDDA E