| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2095 |
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| Symbol | |
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| ID | 4709969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2299883 |
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| End bp | 2301235 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639856569 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001003661 |
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| Protein GI | 121998874 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0892669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCCGT TGAGCCTGGA GCAGATTGCG GCGCTGACCG GTGCCGAGCT GATCGGCAAC
GGTGGCGGGG CCGTGACGGG GGTGGCGCTG GACAGTCGCC GAGCCACTTC GGGGTCGCTC
TTCGTGGCCC TGCCGGGGGC GCGCTGCGAT GGCCACGACT TTGCCGATGA TGCCGCAGCC
CGCGGCGCCG TGGCGGTGCT CGGCACCCGT CCGGTGGGGG CGCTGCCGAC GCTGGTGGTC
GAGGACCCGG CGGCGGCCCT CGCGGTCCTG GGTGCGGAGT GCCGGCGGCG CAGCGGGGTG
CGTCTGGTGG CCGTGACCGG CAGCAACGGC AAGACCACGG TCAAGGAACT GCTGGCCGCG
ATGCTGGCCG AATCCGGGCC AACCCTGGCC ACCGAGGGCA ACCGGAACAA CCTGCTGGGG
GTCCCGGAGA TGCTCTGTCG GCTGGGTGCC GGGCACCGCT TTGCCGTCAT CGAGATGGGC
GCCAACGCCC CGGGCGAGAT CGCTCAGCTG ACCGCCTGGG CGCAGCCCGA CGTGGGCGTG
GTGACCAATG CCGGCCCGGC CCACCTGGAG GGGTTCGGCT CGCTGGACGG GGTCGCCCGC
GCTAAGGGGG AGCTCTTCCA GGGGCTGCCG CGGCAGGGGG TGGCCGTCCT GAATGCCGAC
GACGACTTCT GCGGCTTGTG GCGGGAGATG GCGGGCGCAC GGCGGTGCCT GACCTTTGGC
GCCGACGCCG GACAGTTTCG CCATCGGGGG CATGGCAGCC GGCTGGAGCT GGATCTTGGG
GGCGGCTGGA TGGCGGCGCC GACCCCGCTG CTCGGGGGCC ACAACGCACA GAACATCGCC
GCGGCAGCGG CGTGTGCCGC CGCCCTCGAG GTGCCGGCGC GAACCATCCT CGACCGCATC
TCCTCCGCCG CGGCCGTACC GGGGCGGCTG GAGCTGCGTC GCGGAGATCA CGGCGGCTGG
TTGGTAGACG ACACCTACAA TGCCAACCCC GCCAGCCTGC AGGCGGCCAT CGATACGGTG
ACCGGGTTCC AGGCGGCCCC GTGGCTGCTC CTCGGGGCCA TGGGCGAGCT CGGCGCGGAG
ACTGCGGAGT GGCACAGCCG GGCCGGCCGG CGGGCGCGCG CCGCCGGGGT GGAGCGGCTG
TGGACCCTTG GGGAGGCTGC CGCCCCGGCG GCCGAGGCCT TCGGCGAAGG CGGCCGCTGT
TTTGACAATG CATCGGCGCT GATCGAGGCG TGCCGCGCCG AGTTGCCGGC CGATGCGGTC
GTGCTGATCA AGGGGTCGCG CTCAGCCGCC ATGGAGCGCG TGGCGGCGGG CCTGACCTGC
ACCGAACCAA CAAGAGAAGG GGAGGGACGC TAG
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| Protein sequence | MDPLSLEQIA ALTGAELIGN GGGAVTGVAL DSRRATSGSL FVALPGARCD GHDFADDAAA
RGAVAVLGTR PVGALPTLVV EDPAAALAVL GAECRRRSGV RLVAVTGSNG KTTVKELLAA
MLAESGPTLA TEGNRNNLLG VPEMLCRLGA GHRFAVIEMG ANAPGEIAQL TAWAQPDVGV
VTNAGPAHLE GFGSLDGVAR AKGELFQGLP RQGVAVLNAD DDFCGLWREM AGARRCLTFG
ADAGQFRHRG HGSRLELDLG GGWMAAPTPL LGGHNAQNIA AAAACAAALE VPARTILDRI
SSAAAVPGRL ELRRGDHGGW LVDDTYNANP ASLQAAIDTV TGFQAAPWLL LGAMGELGAE
TAEWHSRAGR RARAAGVERL WTLGEAAAPA AEAFGEGGRC FDNASALIEA CRAELPADAV
VLIKGSRSAA MERVAAGLTC TEPTREGEGR
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