Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2088 |
Symbol | ddl |
ID | 4710084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 2291938 |
End bp | 2292852 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639856562 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_001003654 |
Protein GI | 121998867 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTGGTA TCCCGGATCC GCAGCGGGTG GGGCGCGTCG CCGTGCTGAT GGGCGGCACC TCGGCCGAGC GGGACATCTC CCTGCGCAGT GGCGGCGCGA TACTCGCGGC GCTACAGCGC TGTGGCTACG ACGCCGAGGC CTACGATCCC CGTGACCGCG CCCTGGAAGG GCTGCGCGGC TACGACGTGG TCTTCATCGC CCTTCACGGG CGGGGCGGTG AGGACGGCAC GGTCCAGGGA CTGCTGGATC TGCTCGGAAT CCCGTACACC GGCAGCGGTG TCCTCGGCTC GGCGCTGGGC ATGGACAAGT GGCGCTGCAA GCGGCTCTGG CAGGGCAGTG GCCTGCCCAC GCCGGCGGGT CAGTTGCTGA CCGGCGACCG CCCGGTCCTC GACGAGGGGG TGGGTTACCC AGTGATCGTC AAGCCCGCCC GCGAGGGGTC GAGCCTCGGC ATGAGTCGGG TCGAGGGGCC GGAGGAGCTG GCCGAGGCCT ACCGCGTGGC AGCGGCCTAC GACGATACCG TCCTCGCCGA GGCCTGGGTC GAGGGCGAGG AGTACACCGT GGCGCTGCTC GGTGATCAGG CGTTGCCGTC GATCCGACTG GAGACCCCGC ACGCCTTCTT CGACTACGCG GCCAAGTACC AGGCCGAGGA CACCGGTCAC CACTGCCCGA GCGGTCTCGG GCCGGAGGAA GAGGCCGAAC TTGGCGCCCT GTGTCGGGAG GCCTTTATCG CCAGCGGCGG GAACGGCTGG GGGCGTGTGG ATGTCATGCG GGACACCGGC GGACGCTGGT GGCTGCTGGA GGTGAATACC ATCCCCGGCA TGACCGATCA CTCGCTGGTG CCCATCGCGG CGGCGCAGGC CGGGATCGGC TTCGACGAGC TGGTGGCCCG CATCCTGGGG GAGGCGTTGC GATGA
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Protein sequence | MSGIPDPQRV GRVAVLMGGT SAERDISLRS GGAILAALQR CGYDAEAYDP RDRALEGLRG YDVVFIALHG RGGEDGTVQG LLDLLGIPYT GSGVLGSALG MDKWRCKRLW QGSGLPTPAG QLLTGDRPVL DEGVGYPVIV KPAREGSSLG MSRVEGPEEL AEAYRVAAAY DDTVLAEAWV EGEEYTVALL GDQALPSIRL ETPHAFFDYA AKYQAEDTGH HCPSGLGPEE EAELGALCRE AFIASGGNGW GRVDVMRDTG GRWWLLEVNT IPGMTDHSLV PIAAAQAGIG FDELVARILG EALR
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