Gene Hhal_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2088 
Symbolddl 
ID4710084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2291938 
End bp2292852 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content71% 
IMG OID639856562 
ProductD-alanine--D-alanine ligase 
Protein accessionYP_001003654 
Protein GI121998867 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01205] D-alanine--D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGGTA TCCCGGATCC GCAGCGGGTG GGGCGCGTCG CCGTGCTGAT GGGCGGCACC 
TCGGCCGAGC GGGACATCTC CCTGCGCAGT GGCGGCGCGA TACTCGCGGC GCTACAGCGC
TGTGGCTACG ACGCCGAGGC CTACGATCCC CGTGACCGCG CCCTGGAAGG GCTGCGCGGC
TACGACGTGG TCTTCATCGC CCTTCACGGG CGGGGCGGTG AGGACGGCAC GGTCCAGGGA
CTGCTGGATC TGCTCGGAAT CCCGTACACC GGCAGCGGTG TCCTCGGCTC GGCGCTGGGC
ATGGACAAGT GGCGCTGCAA GCGGCTCTGG CAGGGCAGTG GCCTGCCCAC GCCGGCGGGT
CAGTTGCTGA CCGGCGACCG CCCGGTCCTC GACGAGGGGG TGGGTTACCC AGTGATCGTC
AAGCCCGCCC GCGAGGGGTC GAGCCTCGGC ATGAGTCGGG TCGAGGGGCC GGAGGAGCTG
GCCGAGGCCT ACCGCGTGGC AGCGGCCTAC GACGATACCG TCCTCGCCGA GGCCTGGGTC
GAGGGCGAGG AGTACACCGT GGCGCTGCTC GGTGATCAGG CGTTGCCGTC GATCCGACTG
GAGACCCCGC ACGCCTTCTT CGACTACGCG GCCAAGTACC AGGCCGAGGA CACCGGTCAC
CACTGCCCGA GCGGTCTCGG GCCGGAGGAA GAGGCCGAAC TTGGCGCCCT GTGTCGGGAG
GCCTTTATCG CCAGCGGCGG GAACGGCTGG GGGCGTGTGG ATGTCATGCG GGACACCGGC
GGACGCTGGT GGCTGCTGGA GGTGAATACC ATCCCCGGCA TGACCGATCA CTCGCTGGTG
CCCATCGCGG CGGCGCAGGC CGGGATCGGC TTCGACGAGC TGGTGGCCCG CATCCTGGGG
GAGGCGTTGC GATGA
 
Protein sequence
MSGIPDPQRV GRVAVLMGGT SAERDISLRS GGAILAALQR CGYDAEAYDP RDRALEGLRG 
YDVVFIALHG RGGEDGTVQG LLDLLGIPYT GSGVLGSALG MDKWRCKRLW QGSGLPTPAG
QLLTGDRPVL DEGVGYPVIV KPAREGSSLG MSRVEGPEEL AEAYRVAAAY DDTVLAEAWV
EGEEYTVALL GDQALPSIRL ETPHAFFDYA AKYQAEDTGH HCPSGLGPEE EAELGALCRE
AFIASGGNGW GRVDVMRDTG GRWWLLEVNT IPGMTDHSLV PIAAAQAGIG FDELVARILG
EALR