Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2084 |
Symbol | lpxC |
ID | 4710088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 2287625 |
End bp | 2288527 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639856558 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_001003650 |
Protein GI | 121998863 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.122753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGTC AACGCACCTT GAAGAACAGC ATCCGCGCGA CCGGCGTGGG CCTGCACACC GGCGAGAAGG TCTACCTGAC CCTCCGTCCG GCTCCGGCCA ATGCGGGGAT CATATTCCGG CGCACTGATC TCGACCGCGA GATCAAGGCA ACCGCCGCTG CCGTGGGCGA CACCCGCCTG TCCACCTGCC TGGTGGAAGA CGGGGTGCGG GTTTCCACCG TCGAGCACCT GCTGTCGGCG CTGGCCGGGC TGGGGATCGA CAACTGCTAT GTCGATCTCT CCGCGGCCGA GGTGCCGATC ATGGACGGCA GTGCGGCGCC CTTTGTCTTC CTGGTGCGCT CCGCAGGGAT CAAGGAGCAG GAGGCGCCCA AGCGCTTCGT GCGCATCCTG GAGCCGGTCC AGGTTGTTGA TGGTGACAAG TGGGTGGCCT TCGAGCCCTT CGAGGGCTTC AAGGTCAGCT TCACCATCGA TTTCGACCAC CCGGTCTTCC TCGATCAGCA CGCCCGTGCC GAGGTGGATT TCTCCTCGAC CTCCTTCATC AAGGAGGTCA GCCGTGCGCG GACCTTCGGC TTCATGAAGG AGATCGAGGC CCTGCGGGCC TCCCGGCTGG CCCTCGGTGG CAGCCTCGAC AACGCCATCG TGGTCGACGA CTACCGGGTG CTGAACGAGG ACGGGTTGCG GTACCGGGAC GAGTTCGTCA AGCACAAGAT CCTCGACGCC ATCGGCGACC TTTACCTCTT GGGTAGCAGC CTGATCGGCT CGTTCCACGG GCACAAGTCC GGGCACGCCC TCAATAACCG CCTCCTGCGC AAGCTGCTCG AGCACGAGCA CGCCTGGGAG GAGGTGACCT TTGAGGAGCT GGACGAATTG CCCATCGCCT ACGATCAGCC GGTGGTGGCC TGA
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Protein sequence | MIRQRTLKNS IRATGVGLHT GEKVYLTLRP APANAGIIFR RTDLDREIKA TAAAVGDTRL STCLVEDGVR VSTVEHLLSA LAGLGIDNCY VDLSAAEVPI MDGSAAPFVF LVRSAGIKEQ EAPKRFVRIL EPVQVVDGDK WVAFEPFEGF KVSFTIDFDH PVFLDQHARA EVDFSSTSFI KEVSRARTFG FMKEIEALRA SRLALGGSLD NAIVVDDYRV LNEDGLRYRD EFVKHKILDA IGDLYLLGSS LIGSFHGHKS GHALNNRLLR KLLEHEHAWE EVTFEELDEL PIAYDQPVVA
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