Gene Hhal_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2079 
Symbol 
ID4709989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2282911 
End bp2283729 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content71% 
IMG OID639856553 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_001003645 
Protein GI121998858 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGC CCGGGACGCC GGATATCCTG CGCCGCATCC TGCGCCGTAA GGTCGAGGAG 
GTGGTCGAGC GGGCCGAGAG CCGCTCGCTG CGCGAGCTCT CGGCCGCTGC GGCCGATCTG
CCGCCGACCC GCGGGTTCCG CGACGCGCTG CTGCAGCGGA TCGAGGCCGG GGGTACCGGG
GTGATCGCCG AGATCAAGCG GGCCTCGCCG AGCCGTGGCG TGATCCGCGA GGACTTCCAG
CCGGCGGCTA TCGCCGTCGA TTATCAGCGT CATGGTGCCG CGTGCCTGTC GGTCCTGACC
GACCGCGACT TCTTCCAGGG CGACGACGCC CACCTGCAGG CGGCCCGCGA GGCCGTTCAG
CTGCCGGTGC TCCGCAAGGA TTTCACCGTC GATACCTATC AGGTCTATGA GGCCCGCGTC
CTCGGGGCCG ACTGCATCCT GCTCATCGCC GCGGCGCTGG GCGACGCGCA GCTGGCCGAG
CTGCACGCCT TGGCGGTCGA GCTGGGCATG GATGTGCTGA TCGAGGTCCA CGATGCCGAG
GAACTGGCCC GGGTCGGGCC GCTGGGGCCT GCCCTGGTCG GTGTGAACAA CCGCGATCTG
CGGACCTTCC ACACAGACCT GGCGACCAGT GAGGTGTTGT CCGAGTCGAT GCCGGCCGGC
GCGCTGGCGG TGACCGAGAG CGGCATCCAC ACCCGTGAGG ACGTGGCACG CATGCACGCG
GCGGGGATCC ACGCCTTCCT GGTCGGCGAG GCCTTCATGT CGGCCCCAAG CCCCGGGGCA
CGGCTCGCCG AGCTGTTCGG GAGCCCCGCC GGGGTGTAA
 
Protein sequence
MSAPGTPDIL RRILRRKVEE VVERAESRSL RELSAAAADL PPTRGFRDAL LQRIEAGGTG 
VIAEIKRASP SRGVIREDFQ PAAIAVDYQR HGAACLSVLT DRDFFQGDDA HLQAAREAVQ
LPVLRKDFTV DTYQVYEARV LGADCILLIA AALGDAQLAE LHALAVELGM DVLIEVHDAE
ELARVGPLGP ALVGVNNRDL RTFHTDLATS EVLSESMPAG ALAVTESGIH TREDVARMHA
AGIHAFLVGE AFMSAPSPGA RLAELFGSPA GV