| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2062 |
|---|
| Symbol | |
|---|
| ID | 4710006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 2264476 |
|---|
| End bp | 2266233 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639856535 |
|---|
| Product | poly-beta-hydroxybutyrate polymerase domain-containing protein |
|---|
| Protein accession | YP_001003628 |
|---|
| Protein GI | 121998841 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.691565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCATT CCCTGATGCC CGAATTCGAA GAGAGTGAGC GCGAGGCGCT GACCGCAGAT
CGGCTGTTCA ACGCCGGCTT GGGCCGTTAT ACGCAAGGGC TTTCGCCGGC GGCGGTGTCG
CTGGCGACTT TTGATTGGGC CGTTCACCTG GCGACCCACC CGGGCAAGCA GTTCGCGCTC
ATGGACGAGG CCATGCGCAA CGCCATGCGC TACAATGCCT ACGTCTTCAG CCGCATGACC
GGCACCTGCC CGGAGCCGTG CGCCAAGCCC TGGCCGGGCG ACGACCGCTT CTCCGCCGAG
CAGTGGCAGC GCTTCCCCTA CGACGTCCTG GAGCAGGGCT TCCTGCTCAC CCAGCAGTGG
TGGCACAGCG CCACCACCGG GAACCGCGGG GTGACTCAGC ACCACGAGGA TGTGGTCAAC
TTCCTCGGTC GCCAGGTGCT CGATTTCTAC TCCCCCTCCA ACTTCCTGGC CACCAACCCC
GAGGTGCTCG AGGAGACCCT CAGCCAGGGC GGTGCCAATC TGGTGCAGGG GTTTGCCAAT
CTGCTTGAGG ACACCGAGCG CACCATCAGT GACCGTCCAC CGGTGGGCGC AGAAGATTGG
AAGGTGGGCG AGAACCTGGC GGTGACGCCG GGCAAGGTGG TCTACCGCAA CCGGATCATG
GAGCTGATCC AGTACCAGCC CACCACCAAG ACCGTCTACC CCGAGCCGAT CCTCATCTGC
CCGGCGTGGA TCATGAAGTA CTACATCCTC GACCTGCGCC CCGGCAAATC CCTGATCGAG
TACCTGGTCA GCAAGGGCCA TACGGTCTTC GTCATCTCCT GGAAGAACCC GGGCAGCGAG
GACCGCGATC TGGGCATGGA TACCTACCGC CGGGAAGGCG TCATGGACGC CCTGGAGGCG
GTGACCACCA TCGTCCCCGA ACGCAAGGTC CACACCGTCG GCTACTGCTT GGGGGGCACC
CTGCTGATGC TCGCCGCGGC GACCATGGCG CGAGATGGCG ATGACCGCCT CGCCAGCCTC
AGCCTGCTGG CGGCCCAGGC GGACTTTACC GAGCCCGGCG AGCTGGAGCT GTTCATCGAC
GAGAGCCAGG TCACCTTCCT CGAGGACATG ATGTGGGAGA AGGGCTACCT GGACGGCGCC
AAGATGGCTG GGGCCTTCCA GCTGCTGCGC TCCAAGGACC TGATCTACTC GCGGCTGATC
CACGACTACC TGATGGGCAA GCGGGCCCCG GTGATCGACC TGATGGCGTG GAACGCCGAT
ACCACCCGGC TGCCCTTCCG CATGCATAGC GAGTACCTGC GCGATCTGTT CCTCAACAAC
GACTTCGTCG AGGATCGTTA CGACGTGGGT GGCCAGCCCA TCCACATCGG CGATATCCAG
GTGCCGACCT TCGCCGTGGG GACCGAGAAG GACCACATCG CGCCGTGGCG TTCGGTCTAC
AAGATCAACC GCTTCCTGCC CCGGGCCGAT GTCACCTTCG CGCTGACCCA GGGCGGCCAC
AACGCCGGCA TCGTCACGCC CCCGGGGCAC CCACGCCGCA TCTACCGCAG CCTCGCGCGC
CGCTACGGGG ATCCCTACGT GCCGTCCCAC GTCTTCCTGG AGAAGGCCAC TGAGCAGCAG
GGCTCCTGGT GGCCGGAGTG GGAGCAGTGG CTGCGCGAGC GCTCGGGGAG CCGGGTGGCA
CCGCCGAGCC TGGGCCAGAG CGAGGGGACG TACCAGCCCC TGACCGAAGC CCCCGGCACC
TACGTGCTGC AGTCGTGA
|
|---|
| Protein sequence | MVHSLMPEFE ESEREALTAD RLFNAGLGRY TQGLSPAAVS LATFDWAVHL ATHPGKQFAL
MDEAMRNAMR YNAYVFSRMT GTCPEPCAKP WPGDDRFSAE QWQRFPYDVL EQGFLLTQQW
WHSATTGNRG VTQHHEDVVN FLGRQVLDFY SPSNFLATNP EVLEETLSQG GANLVQGFAN
LLEDTERTIS DRPPVGAEDW KVGENLAVTP GKVVYRNRIM ELIQYQPTTK TVYPEPILIC
PAWIMKYYIL DLRPGKSLIE YLVSKGHTVF VISWKNPGSE DRDLGMDTYR REGVMDALEA
VTTIVPERKV HTVGYCLGGT LLMLAAATMA RDGDDRLASL SLLAAQADFT EPGELELFID
ESQVTFLEDM MWEKGYLDGA KMAGAFQLLR SKDLIYSRLI HDYLMGKRAP VIDLMAWNAD
TTRLPFRMHS EYLRDLFLNN DFVEDRYDVG GQPIHIGDIQ VPTFAVGTEK DHIAPWRSVY
KINRFLPRAD VTFALTQGGH NAGIVTPPGH PRRIYRSLAR RYGDPYVPSH VFLEKATEQQ
GSWWPEWEQW LRERSGSRVA PPSLGQSEGT YQPLTEAPGT YVLQS
|
|---|
| |