Gene Hhal_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2047 
Symbol 
ID4710015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2250700 
End bp2251494 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content71% 
IMG OID639856520 
Productthymidylate synthase 
Protein accessionYP_001003613 
Protein GI121998826 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.412678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCCT ATCTCGATCT CGTCCAACAC GTCCTGGAGC ACGGCCACCG CAAGGAGGAC 
CGCACCGGCA CCGGCACGCT GTCGGTCTTC GGCCACCAGA TGCGCTTCGA TCTGGAGGCG
GGCTTCCCGC TGGTGACCAC CAAGCGGGTC TTCTGGCGCG GCGTGGCCGA GGAGCTGCTG
TGGTTCATCC GCGGCAGCAC CAACGCCCGC GAGCTGGAGG ACAAGGGCGT GCGCATCTGG
TCGCCGTGGG CCGACCCGGA CGGCGAGCTG GGGCCGGTCT ACGGCGCCCA GTGGCGCAGC
TGGCGCGCCG CCGACGGCCG CGAGATCGAC CAGCTCCAGC AGGTCCTGAC CGAACTGCGC
CAGCGCCCCG ACTCGCGCCG GCACCTGGTC AGCGCCTGGA ACGTCGGCGA GCTCGAGCGC
ATGAACCTGC CGCCCTGCCA CCTGCTGTTC CAGTTCTACG TGGCCGAGGG GCGTCTGTCC
TGCCAGCTCT ACCAGCGCAG CGCCGACCTG TTCCTGGGCG TGCCGTTCAA TATCGCCTCC
TACAGCCTGC TGACCCACCT GGTAGCCCGC CACGTGGGGC TGGAGGTGGG CGAGTTCATC
TGGACCGGCG GCGACTGCCA CCTCTACCTC AACCACCTAG CCCAGGCCCG GGAGCAGCTC
AGCCGCGCGC CGCGACCGCT GCCCACCCTG CACATCGACC CTGGGGTCAC CGACCTCTTC
GCGGTGCGCT ACGAGCACCT GCGCCTGGCG GGCTACGACC CCCACCCCAA GCTGACCGCC
CCGGTGGCGG TCTGA
 
Protein sequence
MRAYLDLVQH VLEHGHRKED RTGTGTLSVF GHQMRFDLEA GFPLVTTKRV FWRGVAEELL 
WFIRGSTNAR ELEDKGVRIW SPWADPDGEL GPVYGAQWRS WRAADGREID QLQQVLTELR
QRPDSRRHLV SAWNVGELER MNLPPCHLLF QFYVAEGRLS CQLYQRSADL FLGVPFNIAS
YSLLTHLVAR HVGLEVGEFI WTGGDCHLYL NHLAQAREQL SRAPRPLPTL HIDPGVTDLF
AVRYEHLRLA GYDPHPKLTA PVAV