Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2047 |
Symbol | |
ID | 4710015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2250700 |
End bp | 2251494 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639856520 |
Product | thymidylate synthase |
Protein accession | YP_001003613 |
Protein GI | 121998826 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0207] Thymidylate synthase |
TIGRFAM ID | [TIGR03284] thymidylate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.412678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGCCT ATCTCGATCT CGTCCAACAC GTCCTGGAGC ACGGCCACCG CAAGGAGGAC CGCACCGGCA CCGGCACGCT GTCGGTCTTC GGCCACCAGA TGCGCTTCGA TCTGGAGGCG GGCTTCCCGC TGGTGACCAC CAAGCGGGTC TTCTGGCGCG GCGTGGCCGA GGAGCTGCTG TGGTTCATCC GCGGCAGCAC CAACGCCCGC GAGCTGGAGG ACAAGGGCGT GCGCATCTGG TCGCCGTGGG CCGACCCGGA CGGCGAGCTG GGGCCGGTCT ACGGCGCCCA GTGGCGCAGC TGGCGCGCCG CCGACGGCCG CGAGATCGAC CAGCTCCAGC AGGTCCTGAC CGAACTGCGC CAGCGCCCCG ACTCGCGCCG GCACCTGGTC AGCGCCTGGA ACGTCGGCGA GCTCGAGCGC ATGAACCTGC CGCCCTGCCA CCTGCTGTTC CAGTTCTACG TGGCCGAGGG GCGTCTGTCC TGCCAGCTCT ACCAGCGCAG CGCCGACCTG TTCCTGGGCG TGCCGTTCAA TATCGCCTCC TACAGCCTGC TGACCCACCT GGTAGCCCGC CACGTGGGGC TGGAGGTGGG CGAGTTCATC TGGACCGGCG GCGACTGCCA CCTCTACCTC AACCACCTAG CCCAGGCCCG GGAGCAGCTC AGCCGCGCGC CGCGACCGCT GCCCACCCTG CACATCGACC CTGGGGTCAC CGACCTCTTC GCGGTGCGCT ACGAGCACCT GCGCCTGGCG GGCTACGACC CCCACCCCAA GCTGACCGCC CCGGTGGCGG TCTGA
|
Protein sequence | MRAYLDLVQH VLEHGHRKED RTGTGTLSVF GHQMRFDLEA GFPLVTTKRV FWRGVAEELL WFIRGSTNAR ELEDKGVRIW SPWADPDGEL GPVYGAQWRS WRAADGREID QLQQVLTELR QRPDSRRHLV SAWNVGELER MNLPPCHLLF QFYVAEGRLS CQLYQRSADL FLGVPFNIAS YSLLTHLVAR HVGLEVGEFI WTGGDCHLYL NHLAQAREQL SRAPRPLPTL HIDPGVTDLF AVRYEHLRLA GYDPHPKLTA PVAV
|
| |