Gene Hhal_2044 details

Gene Information

• Locus tag: Hhal_2044
• ID: 4710018
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 2247436
• End bp: 2248146
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639856517
• Product: hypothetical protein
• Protein accession: YP_001003610
• Protein GI: 121998823
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3103] SH3 domain protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.74668
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCATCA AATCCGCCTC TGCCGTCTTC CTCTCCGCCG TCCTGGTCAC CGGCCTGCCG 
CTGACCTCCG CCACGGCACA GACGGCCTAT GTCGGCGACG AGATCAGCAT CTCCTTCCGC 
ACCGGCCCCG GCTCCCAGTA CGCCATCGAG CGCTTCCTGA GCACCGGAGC ACCGCTGGAG 
GTCCTGCCCC TCCCTGAGGA CGCCGAGGAG GATTACGGCG AAGTGGCCCT GGAGGACTGG 
ATCTATGTGC GCGACAACCA GGGCGACGAG GGCTGGGTGC AGGAGCGCTT CCTGATGGCC 
GAGGCGCCGG CGCGGGTGCG CATCGGCCAG GTCGAGGAGG AGCGCGACGC CGCCCGGGAG 
CGGATCGCCG AGCTCGAAGA GGAACTGGCC GAGCAAACGG ATGAGAAGGA CGCCCTGAGC 
GAGGAGCTGG CCGAGGCCGA GGCGCGCATC GAGGAGCTGG AATCCGATCT GGAAGCCGCC 
AGCGACGGCT ACGAACTGGT CGAGGCCAAC GAGCAGCTCC AGGAGCGGGT GGCGCGGCTG 
CTCGAGCGCA ACGAGCAGCT CGAGGAGCAG AACACCGCCC TGGCTGAGCG CAGCCGTCAG 
GAGTGGTTCC TGGCCGGGGC CGGCGTGCTG GTGGGCGGGC TGATCCTCGG CCTGATCCTG 
CCGCACCTGC GCCCGCGTCG CCGGGACGGC TGGGGCGGCG GCGGGCTCTG A 

 

Protein sequence

MRIKSASAVF LSAVLVTGLP LTSATAQTAY VGDEISISFR TGPGSQYAIE RFLSTGAPLE 
VLPLPEDAEE DYGEVALEDW IYVRDNQGDE GWVQERFLMA EAPARVRIGQ VEEERDAARE 
RIAELEEELA EQTDEKDALS EELAEAEARI EELESDLEAA SDGYELVEAN EQLQERVARL 
LERNEQLEEQ NTALAERSRQ EWFLAGAGVL VGGLILGLIL PHLRPRRRDG WGGGGL