Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2024 |
Symbol | |
ID | 4710381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2227039 |
End bp | 2227824 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639856497 |
Product | hypothetical protein |
Protein accession | YP_001003590 |
Protein GI | 121998803 |
COG category | [S] Function unknown |
COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.220235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGACA AGAACCAGGA CTGGGTCGTC TACGAACACC CGCTGAATGA GCGGCTGCGC ACGCTACTGC GGCTGGAATT CCTGATGGAG ACCGCCAGCG CTGCCATGGA GGGCGAGCAG ATCGTGGACA GCCGCATGGC GGTGGAGGCG TTCATCCACA CGCTCAACGT CCTCGAGCGG GGCGAGGTGC GCTCGGAGGT CATCAAGGAG CTCGACCGGC TCTCCACCGA GACCGCCTAC ATGGGCGCCC GCGGCGTGTG GTCCGCGTCC CGGGTCCAGG AAGAGACCGA CCGCTGCCGG CAGCTACTGC GCCGGGTGGG CGAGCCCGAC GCTGCCCTGG GGCAGGAGCT GCGCGAGGAC GAGCTGCTGG GGCTGATCAC CCAGCGCTTC GGCGTGGGCG CCGGCACCTG CAACTTCGAC CTGCCCAGCT ACCACCGCTG GCTGAGCCGC CCCTACGACG AGCGGCGAGC CGACATGCAG CGCTGGTTCG AGAGTTTCGC CGATCTGCGC GCGGCGGTTA CGTTCGCGCT GCGCGTGCAG CGGGACGCCG GGGCCTTCGC CGACGAGGTG GCCGAAGGCG GCTCCTGGCA GCAGCGGACC CCCTACGACA GCCGGGTCAC CCAGATGCTG CGCCTCCAGG CCCCCATGGA GAACGGCGTC ATCCCCGAGA TCAGCGGCAA CCGCCACCTG GTCACCATCC GCTTCCTGCG CCAGCCCGAC ACCCGCAGCC GCCCGGAGCC CGTGGGGGCC GACGTGTCGT TCCGGCTGGC CCGCTGCACG CTGTAA
|
Protein sequence | MSDKNQDWVV YEHPLNERLR TLLRLEFLME TASAAMEGEQ IVDSRMAVEA FIHTLNVLER GEVRSEVIKE LDRLSTETAY MGARGVWSAS RVQEETDRCR QLLRRVGEPD AALGQELRED ELLGLITQRF GVGAGTCNFD LPSYHRWLSR PYDERRADMQ RWFESFADLR AAVTFALRVQ RDAGAFADEV AEGGSWQQRT PYDSRVTQML RLQAPMENGV IPEISGNRHL VTIRFLRQPD TRSRPEPVGA DVSFRLARCT L
|
| |