Gene Hhal_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2024 
Symbol 
ID4710381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2227039 
End bp2227824 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID639856497 
Producthypothetical protein 
Protein accessionYP_001003590 
Protein GI121998803 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.220235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACA AGAACCAGGA CTGGGTCGTC TACGAACACC CGCTGAATGA GCGGCTGCGC 
ACGCTACTGC GGCTGGAATT CCTGATGGAG ACCGCCAGCG CTGCCATGGA GGGCGAGCAG
ATCGTGGACA GCCGCATGGC GGTGGAGGCG TTCATCCACA CGCTCAACGT CCTCGAGCGG
GGCGAGGTGC GCTCGGAGGT CATCAAGGAG CTCGACCGGC TCTCCACCGA GACCGCCTAC
ATGGGCGCCC GCGGCGTGTG GTCCGCGTCC CGGGTCCAGG AAGAGACCGA CCGCTGCCGG
CAGCTACTGC GCCGGGTGGG CGAGCCCGAC GCTGCCCTGG GGCAGGAGCT GCGCGAGGAC
GAGCTGCTGG GGCTGATCAC CCAGCGCTTC GGCGTGGGCG CCGGCACCTG CAACTTCGAC
CTGCCCAGCT ACCACCGCTG GCTGAGCCGC CCCTACGACG AGCGGCGAGC CGACATGCAG
CGCTGGTTCG AGAGTTTCGC CGATCTGCGC GCGGCGGTTA CGTTCGCGCT GCGCGTGCAG
CGGGACGCCG GGGCCTTCGC CGACGAGGTG GCCGAAGGCG GCTCCTGGCA GCAGCGGACC
CCCTACGACA GCCGGGTCAC CCAGATGCTG CGCCTCCAGG CCCCCATGGA GAACGGCGTC
ATCCCCGAGA TCAGCGGCAA CCGCCACCTG GTCACCATCC GCTTCCTGCG CCAGCCCGAC
ACCCGCAGCC GCCCGGAGCC CGTGGGGGCC GACGTGTCGT TCCGGCTGGC CCGCTGCACG
CTGTAA
 
Protein sequence
MSDKNQDWVV YEHPLNERLR TLLRLEFLME TASAAMEGEQ IVDSRMAVEA FIHTLNVLER 
GEVRSEVIKE LDRLSTETAY MGARGVWSAS RVQEETDRCR QLLRRVGEPD AALGQELRED
ELLGLITQRF GVGAGTCNFD LPSYHRWLSR PYDERRADMQ RWFESFADLR AAVTFALRVQ
RDAGAFADEV AEGGSWQQRT PYDSRVTQML RLQAPMENGV IPEISGNRHL VTIRFLRQPD
TRSRPEPVGA DVSFRLARCT L