| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2022 |
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| Symbol | |
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| ID | 4710383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2225508 |
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| End bp | 2226398 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639856495 |
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| Product | prepilin peptidase |
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| Protein accession | YP_001003588 |
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| Protein GI | 121998801 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0169642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCCC ACCACCCAGC GCAGGCGCGG AGGACCATGG AGACCTGGAA TCACGTACCG
GAGTGGATCA TCTGGAGCGG TGCCGGCCTG TTTGGCCTGC TGGTCGGCAG CTTCCTGAAC
GTGGTCGTCC ACCGCCTGCC GGCCATGCTG GAGCGGCGCT GGAGCCACGA GGCCCGGGAC
ATCCTCGGCA CCCCAAAACG GGGCACGCCG GAGCCGGCCT ACCACTTGGG CTGGCCTCCA
TCGCACTGCC CACAGTGCCA CCGGCAGCTG CGTCCGCGGG AGAATATCCC GCTGCTGAGC
TACCTCCTCC AACGCGGACG CTGCAGCGGC TGCGCCGCCC GCATCCCGGC CCGCTACCCG
ATCATTGAGG CGCTCACCGG GATCGCCACG GTGGCGGTGG TGGCCAGCCA CGGGCTCTCC
CCGCTGATGC TCGGCCCGCT GCTGCTGACC TGGGCCCTGA TCGCCGCGGC GGCCATCGAC
TACGAGCACT ACCTCCTGCC CGACGCCCTG ACCCTGCCGG CCCTCTGGCT GGGGTTGATC
TGGAGCGTCG TCGATCCCGG CCCCCCCACC CCCACCGATG CGATCATCGG CGCCGTGGCC
GGCTACCTGG CGCTGTGGGC CATCTTCCAC GGCCACCGGC TGGTCACCGG GCGCGAGGGC
ATGGGCTACG GCGACTTCAA ACTGACCGCC GCCCTGGGGG CCTGGCTGGG CTGGCAGGCC
CTGCCCGCCC TGGTGCTCTT CGCTGCCCTG ACCGGGCTCC TAGTGGCAAT AGTGCTGGCC
GTGCGCAGCC GCCCCCTGGG GCAGCCCCTG CCCTTCGGCC CCGCGCTGGC CCTGGCCGGC
TGGGTGCTTC TGGTCCTGTC CCCCTCCGGC GTGGCCTGGC AACTGGTATG A
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| Protein sequence | MGAHHPAQAR RTMETWNHVP EWIIWSGAGL FGLLVGSFLN VVVHRLPAML ERRWSHEARD
ILGTPKRGTP EPAYHLGWPP SHCPQCHRQL RPRENIPLLS YLLQRGRCSG CAARIPARYP
IIEALTGIAT VAVVASHGLS PLMLGPLLLT WALIAAAAID YEHYLLPDAL TLPALWLGLI
WSVVDPGPPT PTDAIIGAVA GYLALWAIFH GHRLVTGREG MGYGDFKLTA ALGAWLGWQA
LPALVLFAAL TGLLVAIVLA VRSRPLGQPL PFGPALALAG WVLLVLSPSG VAWQLV
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