Gene Hhal_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2018 
Symbol 
ID4710389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2221607 
End bp2222335 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content69% 
IMG OID639856491 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001003584 
Protein GI121998797 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGAGC AGACCCCCAC CAACCGCCGC ACCCGACAGT TCAACCGGCA AGTCCAGCCG 
GAGGGTGAGA AGGACGACGA CAACAGCTGG CTGCTGGTCT ACCTCGACGT CATCACCCTG
CTGCTGATCG TCTTCGTCAT CCTCCTCGCC TTGCTCGAGC CCGAGGAAGA CGACGACCGG
GAGGGTCTCG GCGACGGCAT CCTCGAGGGG CGCGAGCACA TCCTCGAGGG CGAGCCCAGC
GTGCTCGAGG GACTGCCAGA GCCGTTGGAT GAGGCCGACC CGGTCGAGGT CCCCGCAGAA
CTCGAAGAGG CCGGGATCCA GGCCGTCGGC GAGGAGGAGA CCCTCACCTT CCGGCTCGAC
GACGCGGTGC TCTTCGAGAC CGGCCGGGCC GAACTCCAGG CCGAAGGCCA GGCGGCCATC
GACGAACTGA TCCCCATCTT CCAGGCCACC GGTGTGCGCC TGTCGGTGGA AGGGCATACC
GACAACATCC CCATCGCCAC CGGGCAGTTC CCGTCCAACT GGGAGCTCTC TTCGGCGCGG
GCCAGTGCCG TGCTGCGCTA CCTCGAGGAG CAGGGCCTCG ATCCGCGCCG CATGCGCGCC
ATCGGTTACG GCGACATCCG CCCCATCGCC GACAACGAGA CCGCCGAGGG GCGCGCCGAG
AACCGCCGGG TGGAGATCAC CCTGCACTTC GGCACCGACA GCCCGCCGGA GGATCTGCCG
CTGCCGTAG
 
Protein sequence
MAEQTPTNRR TRQFNRQVQP EGEKDDDNSW LLVYLDVITL LLIVFVILLA LLEPEEDDDR 
EGLGDGILEG REHILEGEPS VLEGLPEPLD EADPVEVPAE LEEAGIQAVG EEETLTFRLD
DAVLFETGRA ELQAEGQAAI DELIPIFQAT GVRLSVEGHT DNIPIATGQF PSNWELSSAR
ASAVLRYLEE QGLDPRRMRA IGYGDIRPIA DNETAEGRAE NRRVEITLHF GTDSPPEDLP
LP