Gene Hhal_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2017 
Symbol 
ID4710388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2220686 
End bp2221591 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content66% 
IMG OID639856490 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001003583 
Protein GI121998796 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCGT CTACCCTGGT CGGCATCATC GGCGGGTTGA TCCTGGTCGG CTCGGTGCTG 
TTCATCGCCG CCGAAGAGGC CCTGGTCTTC CTCAACCTCC CCGGCCTGGC GATCGTCCTC
GGCGGCACCC TGGCCGCCAC CTTCCTCGCC TACCCCATGG ACGAGGTGCT GCGCGTCTTC
CGTCTGGTGT GGATCGTCAT CCGCAACGAG CGCGTCTACA CCCGCGACGA CATGGAAGAG
CTGATCCGCA TCTCGCAGCT CTGGTTCAAG GGCGACGTGC GGGCCGTGGA GGACGCACTG
GAGAACGTGG CCAACCCGTT CCTGCGCACC GGGGTGCAGC TGCTCATCGA CCTGACCCCG
GAAGAGGACA TCCTCGACCT GCTGCAGTGG CGCATCCAGC GGCTGCGCGC CAAGGAACAC
GCCGAGGCGC AGATCTTCCG GGTCATGGCG TCCTTCGCGC CGGCCTTCGG CATGATCGGC
ACCCTGGTGG GGCTGATCAA CATGATGTTC ATCCTCGACG ACGGCGATAT CGCCCAGATC
GGCCAGCAGA TGGGTGTGGC GCTGCTCACC ACCTTCTACG GCATCCTGCT CGCCAATCTG
GTGCTCAAAC CCGTCGCAGT GAAGCTTGAG CGGCGCACCG AACAACGCCT GGTGACCCTG
AACATGATCC TCCAGGGCAT CTCGCTGATG TGCCAGAAGC GCAACCCGAC CCTGATGCGG
GAGACGCTCC ACTCGTTCAT CGCCCAGTAT AAGGACGAGA TCCGCGATCC GGACCTGATC
CGACAACTGG AGGAAACCAG CCAGCGGGCG GCGGCCGCCG CTGGATCGCC CTCCGGCGGC
CAGGGCGGCG GCAGTTCGGA GGCGCGCGCC GGCGGCGGAG ACCGCCCCAC CGGCGCCGAG
CGCTAA
 
Protein sequence
MNPSTLVGII GGLILVGSVL FIAAEEALVF LNLPGLAIVL GGTLAATFLA YPMDEVLRVF 
RLVWIVIRNE RVYTRDDMEE LIRISQLWFK GDVRAVEDAL ENVANPFLRT GVQLLIDLTP
EEDILDLLQW RIQRLRAKEH AEAQIFRVMA SFAPAFGMIG TLVGLINMMF ILDDGDIAQI
GQQMGVALLT TFYGILLANL VLKPVAVKLE RRTEQRLVTL NMILQGISLM CQKRNPTLMR
ETLHSFIAQY KDEIRDPDLI RQLEETSQRA AAAAGSPSGG QGGGSSEARA GGGDRPTGAE
R