Gene Hhal_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2016 
Symbol 
ID4710393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2220231 
End bp2220665 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content69% 
IMG OID639856489 
ProductCBS domain-containing protein 
Protein accessionYP_001003582 
Protein GI121998795 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGACT TCCTCAGCTA CCGCGTAAGC GACTACATGA CCGCCGAGCC GAAGACAGTG 
GGGCACGACA CCCCGCTGCG CGAGCTCCAG CGGCTGTTCG ACGGCCACGA CTTCAACGGC
GTCCCGGTGG TCGACGAACA GGGCCAGCTC CTCGGGCTGG CCACCAAGCT CGACCTGCTC
AAGGCGTTCA CCTTCACCCC GGACGCCATG GTGCCGCGCT ACGACGCCAT CATGGAGCGC
CCGGTCCACG AAGTCATGAC CCGCGAGCCG ATCACGGTGG CACCGGACCT GCCCCTGACC
CGCGTCCTCC AGCGCATGGT GGACATGCGC ACCAAGGGCT TCCCGGTGGT CGATGACAGC
AGCCGCGTGG TCGGCGTGAT CGCCCGCGAG GACCTGCTCG GCGCCCTGCG GGACGCCACC
CGCGGCACCG GCTAG
 
Protein sequence
MYDFLSYRVS DYMTAEPKTV GHDTPLRELQ RLFDGHDFNG VPVVDEQGQL LGLATKLDLL 
KAFTFTPDAM VPRYDAIMER PVHEVMTREP ITVAPDLPLT RVLQRMVDMR TKGFPVVDDS
SRVVGVIARE DLLGALRDAT RGTG