Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2014 |
Symbol | |
ID | 4710291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 2217420 |
End bp | 2218700 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639856487 |
Product | major facilitator transporter |
Protein accession | YP_001003580 |
Protein GI | 121998793 |
COG category | [R] General function prediction only |
COG ID | [COG2270] Permeases of the major facilitator superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.273868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGATT TCGCCAACCA GGCCTACACC CTGCTGATCA TCACCGTCAT CTACGGCGAT CTGTTCACCC GGGTCATCGT CGGCGACGCC GGTGACGACT ACCGCCTGGG CAACCTGCTC TGGAGCACGG CCCTGGCGCT GAGCTACCTG GGGGTGGTGG CCACCGCCCC GGTGTTCGGT GCGGTCATGG ACTACGCGGC GGCCAAGCGT CGCTTCCTGT TCCTGAGCTA CGTCACCACG GTGGCCGCCA CCGCCGCGCT CTACTGGGTG GAGCCCGGCT ACGTGGTGCT CGGCTTCGTG CTGATTGTCC TCTCCAGCTA CGCCTACTCC ATGGGCGAGG CGTTCATCGC CGGTTTCCTG CCGGATATCG CCGGGCCGCA GGAGATGGGG CGGGTCTCCG GGTTGGGCTG GTCCTTGGGC TACCTCGGTG GGCTGTTCGC CACCGCGTTC ACGGTGCTGC TGCTCGGTGA GGTCAGCAAG GAGAACTTCG ACCGCATCCG CTGGGTGGGC CCCTTTGCTG CCGCCTTTTT CCTGCTCTGT GCCATCCCCA CCTTCCTGTG GCTGCGCGAG CGCGGGCAGC CCCGGCGCCT GCCGGCCGGA CAGGGCTACG TTCGCCTCGG TATCCAGCGG GTGGGGCAGA CCGTGCGCAG CCTCGGTTAT CTGCGTGACC TGGGGGTGTT CATGATCTCG CTGCTGATGG CCATGTCGGG GCTGGCCATC GTCATCGCCT ACGCCTTCAT CTACGGTGCA CAGGTCATCG GCTGGGATGA GCGGGCGCGC CTGATCATGT TCGTGGTCAC CCAGTTCTCC GCGGCGGCCG GCGCCATCGG CTTCGGGGTG ATCCAGGACC GCTTCGGTGC CCTGCGCACC TACATGGTGA CCCTGGTGAT GTGGGTAGCG GCGATCCTGC TGATCTGGGT GACCCCGGAG CTGACCGAGT GGCTCAATCG TTGGCTGGGC ACGGAGTGGC AGGCGCAGTA CGTCTTCCTG ACCGCCGGGG TGGCCGCGGG GCTGGCCCTG GGGTCGTGCC AGTCGGCCGG GCGGACGCTG GTGGGGCTGT TCGCTCCGCC GGGACGTGCG GCGGAGTTCT TCGGGTTCTG GGGGCTGGCG ACCAAGCTGG CTGCCGCCTT CGGCCTGGTG GCAGTGGGGG CGCTGCAGGC GGCCGTGGGT CTGCAGTCGG CGATCCTGCT CTGCGCCGTG CTGTTTGCCG GCGCGCTGGT GGTGGCCTGG GGGGTCGACG AGGCGCGGGG TCGGGCGCGC GGGCAGGCTT TGGTAGAGTG A
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Protein sequence | MFDFANQAYT LLIITVIYGD LFTRVIVGDA GDDYRLGNLL WSTALALSYL GVVATAPVFG AVMDYAAAKR RFLFLSYVTT VAATAALYWV EPGYVVLGFV LIVLSSYAYS MGEAFIAGFL PDIAGPQEMG RVSGLGWSLG YLGGLFATAF TVLLLGEVSK ENFDRIRWVG PFAAAFFLLC AIPTFLWLRE RGQPRRLPAG QGYVRLGIQR VGQTVRSLGY LRDLGVFMIS LLMAMSGLAI VIAYAFIYGA QVIGWDERAR LIMFVVTQFS AAAGAIGFGV IQDRFGALRT YMVTLVMWVA AILLIWVTPE LTEWLNRWLG TEWQAQYVFL TAGVAAGLAL GSCQSAGRTL VGLFAPPGRA AEFFGFWGLA TKLAAAFGLV AVGALQAAVG LQSAILLCAV LFAGALVVAW GVDEARGRAR GQALVE
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