Gene Hhal_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2003 
Symbol 
ID4711370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2207745 
End bp2208626 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content71% 
IMG OID639856476 
Productribosomal protein L11 methyltransferase 
Protein accessionYP_001003569 
Protein GI121998782 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2264] Ribosomal protein L11 methylase 
TIGRFAM ID[TIGR00406] ribosomal protein L11 methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.221022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCAGT TGCAAGTCAC GCTGGAGGTG GCGGCCGGCG ACCTCGACGC CGTGGATGGC 
GCACTGGAGT TGGCCGGGGC GCTGTCCCAG ACCTATCAGG CCGACGACGG CACCGTGCTC
CTCGAGCCCG GGGTGGGCGA GCACCCGCTG TGGGAGCAGG TGCGGGTCGA TGCGCTTTTT
CCCCCTGAGA CCGACCCCGA TGCCCTGCAC ACCTTGCTGG CCGGGCAGCT GGGGGAGCGG
CTGCGGGGCT GGCAGGCCGA GACGCTGGAG GACCGTGCCT GGGAGCGTGA GTGGCTGGAC
CACTTTCGGC CGATGGCCTT CGGCGAGCGC CTGTGGATCG TCCCCACCGG GGCCGAGCCC
GAGCTGCCTG CCGGCGCGGT GCCGATCCAC CTCGATCCGG GCCTGGCCTT CGGTACCGGG
ACCCATGAGA CCACGGCGCT GTGCCTGGAG TGGCTGGACG GCGAGCCCAT AGCGGGGCGC
AACGGCCTGG ATTACGGCGC CGGATCCGGC ATCCTGGCCG TGGCGGCGGT GCGTCTGGGG
GCGGCCTGCT GCATGGCCGT CGATAACGAT CCTCAGGCGG TGGTCGCCAG CCGCGAGAAT
GCCGAGCGCA ACGGCGTGGC CGAGGATGTC CCGTCTTATG CCGTCGATCA GCGTCCGGCG
TATTGCGCCG ATTTCCTTGT CGCCAATATC CTTGCCTCGA CGCTGGTGGA TCTGGCCGAT
GAGCTGCGCG ATGGGGTCCG TGTCGGCGGA CGCCTGGCGC TCTCCGGGAT CCTCCGGGGG
CAGGAGCAGC AGGTCATGGA TGCCTTCCAG GGCGGCATCG CCTGGGATGC GCCGCGGTGC
TGCGGCGACT GGGTGCTGGT CAGCGGCACC CGTACCGCCT GA
 
Protein sequence
MAQLQVTLEV AAGDLDAVDG ALELAGALSQ TYQADDGTVL LEPGVGEHPL WEQVRVDALF 
PPETDPDALH TLLAGQLGER LRGWQAETLE DRAWEREWLD HFRPMAFGER LWIVPTGAEP
ELPAGAVPIH LDPGLAFGTG THETTALCLE WLDGEPIAGR NGLDYGAGSG ILAVAAVRLG
AACCMAVDND PQAVVASREN AERNGVAEDV PSYAVDQRPA YCADFLVANI LASTLVDLAD
ELRDGVRVGG RLALSGILRG QEQQVMDAFQ GGIAWDAPRC CGDWVLVSGT RTA