Gene Hhal_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1998 
Symbol 
ID4710425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2202899 
End bp2203366 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content63% 
IMG OID639856471 
Productphasin family protein 
Protein accessionYP_001003564 
Protein GI121998777 
COG category 
COG ID 
TIGRFAM ID[TIGR01841] phasin family protein
[TIGR02809] phasin family protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00664406 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGACC AGCTCAACAA GTCCATGCAG CAGTTCCAGA AGATGATGGA GCCCAGCCGC 
AAGCTCAACG CGCTGCTCCT CGAGCACGCC GAGAAGGTGG CCCACCTGAA CCTGGAAGCC
GCCCGTTCCT ACACCGATCT GGCCATGGAG CAGATGCGCA AGGCCATGGA GGTCCGGGAC
CCGGAGAGCT TCCAGAGCTA CCTGAACGAC CAGGGCAAGG TCGTCCAGAC GATGAGCAAC
AAGCTCACGG AGAACGCCAG CACCCTGGCC GACATCAGCA AGAACATGGG CGAAGAGGTG
CAGAAGATCG CCCAAGAGAA CGTCTCCGCC CTCACCGAGA CGATGCAGGG CCAGGCTGAG
AAGGCCTCCG GCAAGGGCCG CAGCGCTGGC AGCAGTGCCG GTAGCAGCGC CTCTGCGGGT
AGCAGCAGTG GCTCCGCTGC CTCCGGCAGC AGCAAGAAGT CCGCGTAA
 
Protein sequence
MQDQLNKSMQ QFQKMMEPSR KLNALLLEHA EKVAHLNLEA ARSYTDLAME QMRKAMEVRD 
PESFQSYLND QGKVVQTMSN KLTENASTLA DISKNMGEEV QKIAQENVSA LTETMQGQAE
KASGKGRSAG SSAGSSASAG SSSGSAASGS SKKSA