Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1998 |
Symbol | |
ID | 4710425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2202899 |
End bp | 2203366 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639856471 |
Product | phasin family protein |
Protein accession | YP_001003564 |
Protein GI | 121998777 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01841] phasin family protein [TIGR02809] phasin family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00664406 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGACC AGCTCAACAA GTCCATGCAG CAGTTCCAGA AGATGATGGA GCCCAGCCGC AAGCTCAACG CGCTGCTCCT CGAGCACGCC GAGAAGGTGG CCCACCTGAA CCTGGAAGCC GCCCGTTCCT ACACCGATCT GGCCATGGAG CAGATGCGCA AGGCCATGGA GGTCCGGGAC CCGGAGAGCT TCCAGAGCTA CCTGAACGAC CAGGGCAAGG TCGTCCAGAC GATGAGCAAC AAGCTCACGG AGAACGCCAG CACCCTGGCC GACATCAGCA AGAACATGGG CGAAGAGGTG CAGAAGATCG CCCAAGAGAA CGTCTCCGCC CTCACCGAGA CGATGCAGGG CCAGGCTGAG AAGGCCTCCG GCAAGGGCCG CAGCGCTGGC AGCAGTGCCG GTAGCAGCGC CTCTGCGGGT AGCAGCAGTG GCTCCGCTGC CTCCGGCAGC AGCAAGAAGT CCGCGTAA
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Protein sequence | MQDQLNKSMQ QFQKMMEPSR KLNALLLEHA EKVAHLNLEA ARSYTDLAME QMRKAMEVRD PESFQSYLND QGKVVQTMSN KLTENASTLA DISKNMGEEV QKIAQENVSA LTETMQGQAE KASGKGRSAG SSAGSSASAG SSSGSAASGS SKKSA
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