Gene Hhal_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1997 
Symbol 
ID4710424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2201556 
End bp2202710 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content68% 
IMG OID639856470 
Producthypothetical protein 
Protein accessionYP_001003563 
Protein GI121998776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.1616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACGTT GCATTGGCCT GGACATGGGG TACGGGTTCA TCAAGATCGA TGACGGCCGC 
GAGGGGCACG TATTCCCCAG CGTCGTCGGC GAGGGCGAAT CGGGCATGCC GATGTCCCTG
GGCGTGGCCC AGCGCAGCGG CAGCAGCGAG CTTCGCATCA CCTACGGCGG CAAGAGCTAC
CTGCTCGGCG ACTACGCCAT CCGCCACTCC CGCCTGGCGC ACCGGGGGCT GTCGCCCACC
CGCGCCGAAG GGGACGACCT CAAGATCCTC TTCCTCGGTG CACTGAGCCT CTACGCCCGC
GAGACCGTGA ACAACTTCCA CGTCGTCACC GGCCTGCCGC CGGGGCGCAT GCACATGGCC
GACGACCTGG TCCGCCAGCT GCGCGGCGAC CATGAAGTCA TCCGCCACGT GGGCGCGAGC
CGCTTCGGGG TAAGCATCCG CCTGGAGCAG ATTGAGGTGG TCCCGCAGCC GGTGGGCAGC
TTCTGGGCCG AGGTGCTGGA TGATCGGGGG CAGATCCGTG GTGATCACCC GCTGCTCAAC
GGCCGGGTCG GGATCATGGA CATCGGCTTC CGGACCAGCG ACTTCGCCAC GGTCATCGAT
GGCGAGTACT CCCCGGGGTT CTGCAAGACG GTGCCGCTGG GCATCTCCTT CGGCTACGAG
GAGATCGCCC AGGAGCTCTC TACCCAGTAC GGGCTCGAGC GCGAGCAGTA CACCCTGGAC
GAGGCCATCA TCCAGGGGCA GGTGAACGTC AACGGCCGCC CGGTGGACAT CGTCGAGCTC
CGCGATCGGA TCTTCGGCGA CATCGCCACC AAGCTGCTGG TCGAGGCGCG CTCGATGTGG
CAGATCCAGG AGTACGACCA CATCATCATC ACCGGCGGCG GCGGCCGGGT GCTTGAGCGC
TACCTGCGTC CGGAACTCTC CCAGGCCCAG CTGGCCCAGG ACTCCGTCAC CGCCAACGCC
CGCGGCTATT TCAACTGGGC CTACTTCAAC GCCCAGCAGC GGGCCGCGGA GATGGGCCAC
GCCACGGAAC AGAGTTCGGC AGAGGACTAC AGCTCCGGCA GCTACGGCAC CGGGAGCACC
ACCTACAGCC GGGGGGGCGA CGACGGCCGA GACAGCGCCG CCGTGCCGCA GTCGCGCAGC
GGCAGCGAGG GCTGA
 
Protein sequence
MERCIGLDMG YGFIKIDDGR EGHVFPSVVG EGESGMPMSL GVAQRSGSSE LRITYGGKSY 
LLGDYAIRHS RLAHRGLSPT RAEGDDLKIL FLGALSLYAR ETVNNFHVVT GLPPGRMHMA
DDLVRQLRGD HEVIRHVGAS RFGVSIRLEQ IEVVPQPVGS FWAEVLDDRG QIRGDHPLLN
GRVGIMDIGF RTSDFATVID GEYSPGFCKT VPLGISFGYE EIAQELSTQY GLEREQYTLD
EAIIQGQVNV NGRPVDIVEL RDRIFGDIAT KLLVEARSMW QIQEYDHIII TGGGGRVLER
YLRPELSQAQ LAQDSVTANA RGYFNWAYFN AQQRAAEMGH ATEQSSAEDY SSGSYGTGST
TYSRGGDDGR DSAAVPQSRS GSEG