Gene Hhal_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1995 
Symbol 
ID4710294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2199916 
End bp2200845 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content66% 
IMG OID639856468 
Productpeptidase M23B 
Protein accessionYP_001003561 
Protein GI121998774 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGATC GTTTCACGGT CACCATCACC GACTTCCGCG GCGCCCGCCA CTACTCGCTG 
CATCAGATCG CCAAGCGCTT CGCGCTGGCC CTGGCCGGAG CGGTGCTGTT GCTGCTGCTC
GCCGGTGCCC TGGCCATCTA CGCGCTCAAC GACACGATCG ATGAACTCGA CCAGGTCCGC
GCCGAGAAGG CGGAGGCCGC CCGCCAGATC GAGCTGCGCA ACGAGCAGCT CCAGGATCTG
GTCAGCGAAC GCGAGCAGGA GATCCACCGC ATGGATCTTG AACTCGGGCA CATCGAGGCG
CTGGTCGGGC TCGACCCGCA GCCCGAGGCC AACCGGCGCG AGCGACTCGA CACCGCCAGC
CAGACGGCGC TGGAAAAGGC GCTGATGTTG CGGACGATCC CCAACGGCTG GCCCCTCAAG
GAGGCGTCGC GGATCACCAG CGGCTACGGC TGGCGGACGC ACCCGGTGAC CGGCGAACGC
TCCTTCCACG CCGCCGTCGA TCTGCGCGCG CCGGTGGGCG AGAAGATCGT CGCCACTGCC
GACGGCGTGG TCAACTACGC CGCCAAGCAC CAGGGCAGCG GGCTCGGCAA GCTGGTCATC
CTCGCCCACG ACTTCGGCTT CCAGACCCAC TACGCCCACC TGAGCAGGAT CGAGGTCGAG
ACCGGCACGT TCGTCGAGGA GGGCGACGTC ATCGCCCGCT CCGGGGCCAC GGGCAACGTC
AACGGCCCCC ACCTGCACTA CGAGATCTGG CACACCCAGC GCAAGCTGAA CCCGGAACCG
TTTCTGGACT GGAGCCTGGA CAACTATGAA GAGCTCTTTG AAGAAGAGGG CCGCGTAAAA
TGGGACTCAT TGGCAAAGGG GATAAATCGA AGAGCCGAGG CCCTGGAACG ACAGTTATCT
GCGACGGCAC GCGACTGGTC GGAGAACTGA
 
Protein sequence
MKDRFTVTIT DFRGARHYSL HQIAKRFALA LAGAVLLLLL AGALAIYALN DTIDELDQVR 
AEKAEAARQI ELRNEQLQDL VSEREQEIHR MDLELGHIEA LVGLDPQPEA NRRERLDTAS
QTALEKALML RTIPNGWPLK EASRITSGYG WRTHPVTGER SFHAAVDLRA PVGEKIVATA
DGVVNYAAKH QGSGLGKLVI LAHDFGFQTH YAHLSRIEVE TGTFVEEGDV IARSGATGNV
NGPHLHYEIW HTQRKLNPEP FLDWSLDNYE ELFEEEGRVK WDSLAKGINR RAEALERQLS
ATARDWSEN